Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 AC131097.2-203ENST00000401641 507 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
TIMP1P01033 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
TIMP1P01033 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC16.8■□□□□ 0.28
TIMP1P01033 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
TIMP1P01033 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC16.8■□□□□ 0.28
TIMP1P01033 MCPH1-AS1-203ENST00000525186 869 ntTSL 3 BASIC16.8■□□□□ 0.28
TIMP1P01033 EHF-205ENST00000527935 557 ntTSL 2 BASIC16.8■□□□□ 0.28
TIMP1P01033 AL161670.2-201ENST00000557650 1227 ntBASIC16.8■□□□□ 0.28
TIMP1P01033 AP000894.2-204ENST00000577358 473 ntTSL 5 BASIC16.8■□□□□ 0.28
TIMP1P01033 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TIMP1P01033 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TIMP1P01033 AC026740.1-201ENST00000607068 791 ntBASIC16.8■□□□□ 0.28
TIMP1P01033 AL645608.8-201ENST00000606034 2086 ntBASIC16.8■□□□□ 0.28
TIMP1P01033 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TIMP1P01033 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TIMP1P01033 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TIMP1P01033 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC16.8■□□□□ 0.28
TIMP1P01033 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TIMP1P01033 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TIMP1P01033 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
TIMP1P01033 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TIMP1P01033 ALOX12P2-203ENST00000570921 1945 ntBASIC16.8■□□□□ 0.28
TIMP1P01033 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TIMP1P01033 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TIMP1P01033 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
TIMP1P01033 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TIMP1P01033 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TIMP1P01033 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC16.8■□□□□ 0.28
TIMP1P01033 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
TIMP1P01033 MFF-204ENST00000353339 2186 ntTSL 5 BASIC16.79■□□□□ 0.28
TIMP1P01033 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC16.79■□□□□ 0.28
TIMP1P01033 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
TIMP1P01033 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TIMP1P01033 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TIMP1P01033 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TIMP1P01033 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC16.79■□□□□ 0.28
TIMP1P01033 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC16.79■□□□□ 0.28
TIMP1P01033 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TIMP1P01033 STX1A-202ENST00000395154 1022 ntTSL 3 BASIC16.79■□□□□ 0.28
TIMP1P01033 ACTG1P2-201ENST00000415776 1125 ntBASIC16.79■□□□□ 0.28
TIMP1P01033 POM121L8P-201ENST00000417732 1281 ntBASIC16.79■□□□□ 0.28
TIMP1P01033 ACTG1P11-201ENST00000425411 1125 ntBASIC16.79■□□□□ 0.28
TIMP1P01033 AC069218.1-201ENST00000435269 762 ntBASIC16.79■□□□□ 0.28
TIMP1P01033 POM121L9P-203ENST00000441984 1285 ntBASIC16.79■□□□□ 0.28
TIMP1P01033 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC16.79■□□□□ 0.28
TIMP1P01033 AL391280.1-201ENST00000506969 1062 ntBASIC16.79■□□□□ 0.28
TIMP1P01033 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC16.79■□□□□ 0.28
TIMP1P01033 INO80C-210ENST00000590757 595 ntTSL 2 BASIC16.79■□□□□ 0.28
TIMP1P01033 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TIMP1P01033 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TIMP1P01033 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
TIMP1P01033 FLII-221ENST00000578558 2377 ntTSL 5 BASIC16.79■□□□□ 0.28
TIMP1P01033 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
TIMP1P01033 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TIMP1P01033 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TIMP1P01033 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC16.79■□□□□ 0.28
TIMP1P01033 KRT8P14-201ENST00000414254 1442 ntBASIC16.79■□□□□ 0.28
TIMP1P01033 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
TIMP1P01033 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
TIMP1P01033 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
TIMP1P01033 AC090340.1-201ENST00000620778 4980 ntBASIC16.78■□□□□ 0.28
TIMP1P01033 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
TIMP1P01033 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TIMP1P01033 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TIMP1P01033 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
TIMP1P01033 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TIMP1P01033 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC16.78■□□□□ 0.28
TIMP1P01033 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TIMP1P01033 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC16.78■□□□□ 0.28
TIMP1P01033 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TIMP1P01033 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TIMP1P01033 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC16.78■□□□□ 0.28
TIMP1P01033 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TIMP1P01033 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TIMP1P01033 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC16.78■□□□□ 0.28
TIMP1P01033 MIR648-201ENST00000385046 94 ntBASIC16.78■□□□□ 0.28
TIMP1P01033 PARVG-202ENST00000415224 999 ntTSL 2 BASIC16.78■□□□□ 0.28
TIMP1P01033 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
TIMP1P01033 AC106794.1-201ENST00000506935 792 ntBASIC16.78■□□□□ 0.28
TIMP1P01033 WSPAR-201ENST00000513561 683 ntTSL 3 BASIC16.78■□□□□ 0.28
TIMP1P01033 AP003171.2-201ENST00000528208 925 ntBASIC16.78■□□□□ 0.28
TIMP1P01033 IQSEC3P1-201ENST00000538799 536 ntBASIC16.78■□□□□ 0.28
TIMP1P01033 SLIRP-210ENST00000557431 725 ntTSL 2 BASIC16.78■□□□□ 0.28
TIMP1P01033 AC013355.1-201ENST00000562625 723 ntBASIC16.78■□□□□ 0.28
TIMP1P01033 AC020763.1-201ENST00000567186 551 ntTSL 4 BASIC16.78■□□□□ 0.28
TIMP1P01033 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC16.78■□□□□ 0.28
TIMP1P01033 MIR3147-201ENST00000577811 66 ntBASIC16.78■□□□□ 0.28
TIMP1P01033 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TIMP1P01033 COX10-AS1-206ENST00000602743 576 ntTSL 5 BASIC16.78■□□□□ 0.28
TIMP1P01033 AP000346.4-201ENST00000614827 381 ntBASIC16.78■□□□□ 0.28
TIMP1P01033 AP003419.4-201ENST00000616071 517 ntBASIC16.78■□□□□ 0.28
TIMP1P01033 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC16.78■□□□□ 0.28
TIMP1P01033 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
TIMP1P01033 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TIMP1P01033 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
TIMP1P01033 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC16.78■□□□□ 0.28
TIMP1P01033 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
TIMP1P01033 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TIMP1P01033 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC16.78■□□□□ 0.28
TIMP1P01033 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 87.1 ms