Protein–RNA interactions for Protein: O95170

CDRT1, CMT1A duplicated region transcript 1 protein, humanhuman

Predictions only

Length 752 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1O95170 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
CDRT1O95170 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CDRT1O95170 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC14.17□□□□□ -0.14
CDRT1O95170 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CDRT1O95170 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CDRT1O95170 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CDRT1O95170 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CDRT1O95170 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CDRT1O95170 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CDRT1O95170 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
CDRT1O95170 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CDRT1O95170 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC14.17□□□□□ -0.14
CDRT1O95170 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
CDRT1O95170 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
CDRT1O95170 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC14.17□□□□□ -0.14
CDRT1O95170 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CDRT1O95170 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CDRT1O95170 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
CDRT1O95170 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC14.17□□□□□ -0.14
CDRT1O95170 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CDRT1O95170 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
CDRT1O95170 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CDRT1O95170 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
CDRT1O95170 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
CDRT1O95170 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC14.16□□□□□ -0.14
CDRT1O95170 AMT-204ENST00000427987 1646 ntTSL 5 BASIC14.16□□□□□ -0.14
CDRT1O95170 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CDRT1O95170 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CDRT1O95170 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CDRT1O95170 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CDRT1O95170 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CDRT1O95170 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CDRT1O95170 AKR1C7P-201ENST00000305623 895 ntBASIC14.16□□□□□ -0.14
CDRT1O95170 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CDRT1O95170 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CDRT1O95170 LAGE3P1-201ENST00000425356 484 ntBASIC14.16□□□□□ -0.14
CDRT1O95170 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
CDRT1O95170 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC14.16□□□□□ -0.14
CDRT1O95170 EHF-205ENST00000527935 557 ntTSL 2 BASIC14.16□□□□□ -0.14
CDRT1O95170 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CDRT1O95170 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC14.16□□□□□ -0.14
CDRT1O95170 AC005412.3-201ENST00000580309 715 ntBASIC14.16□□□□□ -0.14
CDRT1O95170 PRR29-207ENST00000580752 458 ntTSL 3 BASIC14.16□□□□□ -0.14
CDRT1O95170 PNMT-203ENST00000581428 677 ntTSL 2 BASIC14.16□□□□□ -0.14
CDRT1O95170 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CDRT1O95170 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC14.16□□□□□ -0.14
CDRT1O95170 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
CDRT1O95170 RELA-227ENST00000615805 2236 ntTSL 5 BASIC14.16□□□□□ -0.14
CDRT1O95170 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CDRT1O95170 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC14.16□□□□□ -0.14
CDRT1O95170 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
CDRT1O95170 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CDRT1O95170 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC14.16□□□□□ -0.14
CDRT1O95170 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
CDRT1O95170 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
CDRT1O95170 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
CDRT1O95170 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC14.16□□□□□ -0.14
CDRT1O95170 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CDRT1O95170 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
CDRT1O95170 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CDRT1O95170 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CDRT1O95170 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
CDRT1O95170 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
CDRT1O95170 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CDRT1O95170 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CDRT1O95170 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CDRT1O95170 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC14.15□□□□□ -0.14
CDRT1O95170 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CDRT1O95170 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC14.15□□□□□ -0.14
CDRT1O95170 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CDRT1O95170 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CDRT1O95170 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CDRT1O95170 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CDRT1O95170 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
CDRT1O95170 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC14.15□□□□□ -0.14
CDRT1O95170 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CDRT1O95170 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CDRT1O95170 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC14.15□□□□□ -0.14
CDRT1O95170 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
CDRT1O95170 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CDRT1O95170 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CDRT1O95170 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
CDRT1O95170 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC14.15□□□□□ -0.14
CDRT1O95170 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CDRT1O95170 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC14.15□□□□□ -0.14
CDRT1O95170 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
CDRT1O95170 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC14.15□□□□□ -0.14
CDRT1O95170 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC14.15□□□□□ -0.14
CDRT1O95170 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CDRT1O95170 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC14.15□□□□□ -0.14
CDRT1O95170 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CDRT1O95170 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CDRT1O95170 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CDRT1O95170 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC14.15□□□□□ -0.14
CDRT1O95170 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CDRT1O95170 HIST2H3DP1-201ENST00000401004 416 ntBASIC14.15□□□□□ -0.14
CDRT1O95170 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CDRT1O95170 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC14.15□□□□□ -0.14
CDRT1O95170 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC14.15□□□□□ -0.14
CDRT1O95170 SKP2-204ENST00000508514 821 ntTSL 3 BASIC14.15□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 62.7 ms