Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC20.45■□□□□ 0.86
LTN1O94822 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC20.45■□□□□ 0.86
LTN1O94822 WT1-209ENST00000530998 2421 ntTSL 2 BASIC20.44■□□□□ 0.86
LTN1O94822 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC20.44■□□□□ 0.86
LTN1O94822 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
LTN1O94822 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC20.44■□□□□ 0.86
LTN1O94822 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC20.44■□□□□ 0.86
LTN1O94822 PTPA-218ENST00000435132 618 ntTSL 2 BASIC20.44■□□□□ 0.86
LTN1O94822 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
LTN1O94822 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC20.44■□□□□ 0.86
LTN1O94822 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
LTN1O94822 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.86
LTN1O94822 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
LTN1O94822 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
LTN1O94822 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC20.44■□□□□ 0.86
LTN1O94822 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC20.44■□□□□ 0.86
LTN1O94822 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
LTN1O94822 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC20.44■□□□□ 0.86
LTN1O94822 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC20.44■□□□□ 0.86
LTN1O94822 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
LTN1O94822 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC20.44■□□□□ 0.86
LTN1O94822 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC20.44■□□□□ 0.86
LTN1O94822 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
LTN1O94822 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
LTN1O94822 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC20.44■□□□□ 0.86
LTN1O94822 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
LTN1O94822 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC20.44■□□□□ 0.86
LTN1O94822 AC007274.2-201ENST00000421675 662 ntBASIC20.44■□□□□ 0.86
LTN1O94822 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
LTN1O94822 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC20.44■□□□□ 0.86
LTN1O94822 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC20.44■□□□□ 0.86
LTN1O94822 AC091544.8-201ENST00000619490 361 ntBASIC20.44■□□□□ 0.86
LTN1O94822 AC138466.3-201ENST00000619983 221 ntBASIC20.44■□□□□ 0.86
LTN1O94822 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC20.44■□□□□ 0.86
LTN1O94822 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
LTN1O94822 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC20.43■□□□□ 0.86
LTN1O94822 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
LTN1O94822 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
LTN1O94822 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
LTN1O94822 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
LTN1O94822 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
LTN1O94822 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
LTN1O94822 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
LTN1O94822 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
LTN1O94822 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC20.43■□□□□ 0.86
LTN1O94822 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
LTN1O94822 SPTLC1P5-201ENST00000450718 252 ntBASIC20.43■□□□□ 0.86
LTN1O94822 IMP3P2-201ENST00000489760 475 ntBASIC20.43■□□□□ 0.86
LTN1O94822 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
LTN1O94822 AC008438.1-201ENST00000507521 549 ntTSL 2 BASIC20.43■□□□□ 0.86
LTN1O94822 AC126915.1-201ENST00000522847 1038 ntBASIC20.43■□□□□ 0.86
LTN1O94822 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC20.43■□□□□ 0.86
LTN1O94822 AL645939.5-201ENST00000606834 243 ntBASIC20.43■□□□□ 0.86
LTN1O94822 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
LTN1O94822 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
LTN1O94822 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
LTN1O94822 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
LTN1O94822 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
LTN1O94822 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC20.42■□□□□ 0.86
LTN1O94822 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
LTN1O94822 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
LTN1O94822 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
LTN1O94822 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
LTN1O94822 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
LTN1O94822 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC20.42■□□□□ 0.86
LTN1O94822 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
LTN1O94822 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
LTN1O94822 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC20.42■□□□□ 0.86
LTN1O94822 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC20.42■□□□□ 0.86
LTN1O94822 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
LTN1O94822 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
LTN1O94822 FXNP2-201ENST00000411625 547 ntBASIC20.42■□□□□ 0.86
LTN1O94822 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC20.42■□□□□ 0.86
LTN1O94822 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC20.42■□□□□ 0.86
LTN1O94822 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
LTN1O94822 INO80C-210ENST00000590757 595 ntTSL 2 BASIC20.42■□□□□ 0.86
LTN1O94822 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
LTN1O94822 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC20.42■□□□□ 0.86
LTN1O94822 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC20.42■□□□□ 0.86
LTN1O94822 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC20.42■□□□□ 0.86
LTN1O94822 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
LTN1O94822 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
LTN1O94822 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC20.42■□□□□ 0.86
LTN1O94822 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
LTN1O94822 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC20.42■□□□□ 0.86
LTN1O94822 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
LTN1O94822 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
LTN1O94822 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
LTN1O94822 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
LTN1O94822 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
LTN1O94822 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
LTN1O94822 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC20.42■□□□□ 0.86
LTN1O94822 RPS15-201ENST00000233609 534 ntTSL 2 BASIC20.41■□□□□ 0.86
LTN1O94822 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
LTN1O94822 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
LTN1O94822 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
LTN1O94822 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC20.41■□□□□ 0.86
LTN1O94822 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC20.41■□□□□ 0.86
LTN1O94822 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC20.41■□□□□ 0.86
LTN1O94822 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms