Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC16.49■□□□□ 0.23
BEST1O76090 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC16.49■□□□□ 0.23
BEST1O76090 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC16.49■□□□□ 0.23
BEST1O76090 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC16.49■□□□□ 0.23
BEST1O76090 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
BEST1O76090 RBM7-207ENST00000544582 692 ntTSL 3 BASIC16.49■□□□□ 0.23
BEST1O76090 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC16.49■□□□□ 0.23
BEST1O76090 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC16.49■□□□□ 0.23
BEST1O76090 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
BEST1O76090 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC16.49■□□□□ 0.23
BEST1O76090 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
BEST1O76090 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
BEST1O76090 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
BEST1O76090 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
BEST1O76090 POLL-217ENST00000628479 1953 ntTSL 5 BASIC16.49■□□□□ 0.23
BEST1O76090 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
BEST1O76090 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC16.49■□□□□ 0.23
BEST1O76090 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC16.49■□□□□ 0.23
BEST1O76090 AMT-232ENST00000636199 1546 ntTSL 5 BASIC16.49■□□□□ 0.23
BEST1O76090 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
BEST1O76090 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC16.49■□□□□ 0.23
BEST1O76090 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
BEST1O76090 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC16.49■□□□□ 0.23
BEST1O76090 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
BEST1O76090 MFF-204ENST00000353339 2186 ntTSL 5 BASIC16.48■□□□□ 0.23
BEST1O76090 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
BEST1O76090 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC16.48■□□□□ 0.23
BEST1O76090 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
BEST1O76090 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
BEST1O76090 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
BEST1O76090 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC16.48■□□□□ 0.23
BEST1O76090 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
BEST1O76090 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
BEST1O76090 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
BEST1O76090 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
BEST1O76090 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
BEST1O76090 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
BEST1O76090 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
BEST1O76090 EDF1-203ENST00000371649 790 ntTSL 2 BASIC16.48■□□□□ 0.23
BEST1O76090 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC16.48■□□□□ 0.23
BEST1O76090 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC16.48■□□□□ 0.23
BEST1O76090 PTPA-220ENST00000436883 532 ntTSL 4 BASIC16.48■□□□□ 0.23
BEST1O76090 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC16.48■□□□□ 0.23
BEST1O76090 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC16.48■□□□□ 0.23
BEST1O76090 AC104596.2-201ENST00000512793 793 ntBASIC16.48■□□□□ 0.23
BEST1O76090 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC16.48■□□□□ 0.23
BEST1O76090 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC16.48■□□□□ 0.23
BEST1O76090 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC16.48■□□□□ 0.23
BEST1O76090 UBL5-208ENST00000593087 320 ntTSL 3 BASIC16.48■□□□□ 0.23
BEST1O76090 BRI3BPP1-201ENST00000594224 787 ntBASIC16.48■□□□□ 0.23
BEST1O76090 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC16.48■□□□□ 0.23
BEST1O76090 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
BEST1O76090 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC16.48■□□□□ 0.23
BEST1O76090 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
BEST1O76090 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC16.48■□□□□ 0.23
BEST1O76090 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
BEST1O76090 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC16.48■□□□□ 0.23
BEST1O76090 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
BEST1O76090 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC16.48■□□□□ 0.23
BEST1O76090 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
BEST1O76090 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
BEST1O76090 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
BEST1O76090 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC16.48■□□□□ 0.23
BEST1O76090 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
BEST1O76090 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
BEST1O76090 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
BEST1O76090 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
BEST1O76090 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
BEST1O76090 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
BEST1O76090 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
BEST1O76090 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
BEST1O76090 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
BEST1O76090 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
BEST1O76090 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
BEST1O76090 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
BEST1O76090 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC16.48■□□□□ 0.23
BEST1O76090 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
BEST1O76090 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC16.47■□□□□ 0.23
BEST1O76090 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
BEST1O76090 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
BEST1O76090 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
BEST1O76090 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
BEST1O76090 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC16.47■□□□□ 0.23
BEST1O76090 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
BEST1O76090 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
BEST1O76090 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
BEST1O76090 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
BEST1O76090 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
BEST1O76090 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
BEST1O76090 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC16.47■□□□□ 0.23
BEST1O76090 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
BEST1O76090 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
BEST1O76090 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
BEST1O76090 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
BEST1O76090 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
BEST1O76090 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC16.47■□□□□ 0.23
BEST1O76090 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC16.47■□□□□ 0.23
BEST1O76090 HNRNPA1P13-201ENST00000510646 963 ntBASIC16.47■□□□□ 0.23
BEST1O76090 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC16.47■□□□□ 0.23
BEST1O76090 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms