Protein–RNA interactions for Protein: C9JG80

NPIPB4, Nuclear pore complex-interacting protein family member B4, humanhuman

Predictions only

Length 1,138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4C9JG80 CYP2AB1P-202ENST00000454440 1456 ntBASIC13.94□□□□□ -0.18
NPIPB4C9JG80 PGR-210ENST00000619228 3038 ntTSL 5 BASIC13.94□□□□□ -0.18
NPIPB4C9JG80 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC13.94□□□□□ -0.18
NPIPB4C9JG80 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
NPIPB4C9JG80 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
NPIPB4C9JG80 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC13.94□□□□□ -0.18
NPIPB4C9JG80 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
NPIPB4C9JG80 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
NPIPB4C9JG80 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
NPIPB4C9JG80 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
NPIPB4C9JG80 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
NPIPB4C9JG80 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC13.94□□□□□ -0.18
NPIPB4C9JG80 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
NPIPB4C9JG80 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
NPIPB4C9JG80 GHSR-202ENST00000427970 912 ntBASIC13.94□□□□□ -0.18
NPIPB4C9JG80 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC13.94□□□□□ -0.18
NPIPB4C9JG80 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC13.94□□□□□ -0.18
NPIPB4C9JG80 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
NPIPB4C9JG80 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC13.94□□□□□ -0.18
NPIPB4C9JG80 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC13.94□□□□□ -0.18
NPIPB4C9JG80 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
NPIPB4C9JG80 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
NPIPB4C9JG80 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
NPIPB4C9JG80 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
NPIPB4C9JG80 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC13.94□□□□□ -0.18
NPIPB4C9JG80 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC13.94□□□□□ -0.18
NPIPB4C9JG80 AC004449.1-201ENST00000564240 433 ntBASIC13.94□□□□□ -0.18
NPIPB4C9JG80 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
NPIPB4C9JG80 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
NPIPB4C9JG80 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC13.94□□□□□ -0.18
NPIPB4C9JG80 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC13.94□□□□□ -0.18
NPIPB4C9JG80 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
NPIPB4C9JG80 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
NPIPB4C9JG80 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC13.94□□□□□ -0.18
NPIPB4C9JG80 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC13.94□□□□□ -0.18
NPIPB4C9JG80 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
NPIPB4C9JG80 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
NPIPB4C9JG80 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
NPIPB4C9JG80 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
NPIPB4C9JG80 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
NPIPB4C9JG80 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
NPIPB4C9JG80 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
NPIPB4C9JG80 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
NPIPB4C9JG80 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC13.94□□□□□ -0.18
NPIPB4C9JG80 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
NPIPB4C9JG80 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
NPIPB4C9JG80 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
NPIPB4C9JG80 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC13.93□□□□□ -0.18
NPIPB4C9JG80 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NPIPB4C9JG80 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC13.93□□□□□ -0.18
NPIPB4C9JG80 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
NPIPB4C9JG80 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
NPIPB4C9JG80 AC138969.3-201ENST00000546612 1459 ntBASIC13.93□□□□□ -0.18
NPIPB4C9JG80 AC138932.2-201ENST00000548268 1459 ntBASIC13.93□□□□□ -0.18
NPIPB4C9JG80 AC126755.4-201ENST00000549796 1459 ntBASIC13.93□□□□□ -0.18
NPIPB4C9JG80 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
NPIPB4C9JG80 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
NPIPB4C9JG80 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
NPIPB4C9JG80 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
NPIPB4C9JG80 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
NPIPB4C9JG80 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NPIPB4C9JG80 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
NPIPB4C9JG80 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
NPIPB4C9JG80 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
NPIPB4C9JG80 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NPIPB4C9JG80 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
NPIPB4C9JG80 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
NPIPB4C9JG80 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
NPIPB4C9JG80 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC13.93□□□□□ -0.18
NPIPB4C9JG80 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
NPIPB4C9JG80 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
NPIPB4C9JG80 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
NPIPB4C9JG80 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
NPIPB4C9JG80 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC13.93□□□□□ -0.18
NPIPB4C9JG80 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC13.93□□□□□ -0.18
NPIPB4C9JG80 FAM86GP-201ENST00000448322 971 ntBASIC13.93□□□□□ -0.18
NPIPB4C9JG80 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC13.93□□□□□ -0.18
NPIPB4C9JG80 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC13.93□□□□□ -0.18
NPIPB4C9JG80 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC13.93□□□□□ -0.18
NPIPB4C9JG80 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
NPIPB4C9JG80 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
NPIPB4C9JG80 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC13.93□□□□□ -0.18
NPIPB4C9JG80 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
NPIPB4C9JG80 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC13.93□□□□□ -0.18
NPIPB4C9JG80 WDR88-203ENST00000592765 651 ntTSL 5 BASIC13.93□□□□□ -0.18
NPIPB4C9JG80 AC011467.4-201ENST00000594891 528 ntBASIC13.93□□□□□ -0.18
NPIPB4C9JG80 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
NPIPB4C9JG80 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NPIPB4C9JG80 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
NPIPB4C9JG80 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NPIPB4C9JG80 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NPIPB4C9JG80 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NPIPB4C9JG80 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NPIPB4C9JG80 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NPIPB4C9JG80 WASH3P-207ENST00000560956 1394 ntBASIC13.93□□□□□ -0.18
NPIPB4C9JG80 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
NPIPB4C9JG80 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC13.93□□□□□ -0.18
NPIPB4C9JG80 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC13.93□□□□□ -0.18
NPIPB4C9JG80 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NPIPB4C9JG80 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 75.2 ms