Protein–RNA interactions for Protein: A6NDS4

TBC1D3B, TBC1 domain family member 3B, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3BA6NDS4 AC011447.5-201ENST00000616168 564 ntBASIC15.99■□□□□ 0.15
TBC1D3BA6NDS4 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
TBC1D3BA6NDS4 AL033527.4-201ENST00000641026 673 ntBASIC15.99■□□□□ 0.15
TBC1D3BA6NDS4 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
TBC1D3BA6NDS4 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
TBC1D3BA6NDS4 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
TBC1D3BA6NDS4 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TBC1D3BA6NDS4 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC15.99■□□□□ 0.15
TBC1D3BA6NDS4 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC15.99■□□□□ 0.15
TBC1D3BA6NDS4 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC15.99■□□□□ 0.15
TBC1D3BA6NDS4 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
TBC1D3BA6NDS4 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TBC1D3BA6NDS4 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TBC1D3BA6NDS4 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TBC1D3BA6NDS4 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
TBC1D3BA6NDS4 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
TBC1D3BA6NDS4 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TBC1D3BA6NDS4 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TBC1D3BA6NDS4 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TBC1D3BA6NDS4 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
TBC1D3BA6NDS4 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TBC1D3BA6NDS4 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC15.98■□□□□ 0.15
TBC1D3BA6NDS4 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TBC1D3BA6NDS4 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TBC1D3BA6NDS4 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC15.98■□□□□ 0.15
TBC1D3BA6NDS4 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TBC1D3BA6NDS4 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TBC1D3BA6NDS4 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
TBC1D3BA6NDS4 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TBC1D3BA6NDS4 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
TBC1D3BA6NDS4 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
TBC1D3BA6NDS4 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
TBC1D3BA6NDS4 RPF1-202ENST00000370656 724 ntTSL 2 BASIC15.98■□□□□ 0.15
TBC1D3BA6NDS4 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
TBC1D3BA6NDS4 BAATP1-201ENST00000412284 1225 ntBASIC15.98■□□□□ 0.15
TBC1D3BA6NDS4 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
TBC1D3BA6NDS4 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC15.98■□□□□ 0.15
TBC1D3BA6NDS4 AC092658.1-201ENST00000505836 891 ntBASIC15.98■□□□□ 0.15
TBC1D3BA6NDS4 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
TBC1D3BA6NDS4 AP001063.1-201ENST00000568332 529 ntBASIC15.98■□□□□ 0.15
TBC1D3BA6NDS4 CLUHP6-201ENST00000580789 941 ntBASIC15.98■□□□□ 0.15
TBC1D3BA6NDS4 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC15.98■□□□□ 0.15
TBC1D3BA6NDS4 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC15.98■□□□□ 0.15
TBC1D3BA6NDS4 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
TBC1D3BA6NDS4 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC15.98■□□□□ 0.15
TBC1D3BA6NDS4 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC15.98■□□□□ 0.15
TBC1D3BA6NDS4 AC000095.1-201ENST00000603208 874 ntBASIC15.98■□□□□ 0.15
TBC1D3BA6NDS4 METTL26-214ENST00000614890 801 ntTSL 3 BASIC15.98■□□□□ 0.15
TBC1D3BA6NDS4 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
TBC1D3BA6NDS4 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
TBC1D3BA6NDS4 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TBC1D3BA6NDS4 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC15.98■□□□□ 0.15
TBC1D3BA6NDS4 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC15.98■□□□□ 0.15
TBC1D3BA6NDS4 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC15.98■□□□□ 0.15
TBC1D3BA6NDS4 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
TBC1D3BA6NDS4 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC15.98■□□□□ 0.15
TBC1D3BA6NDS4 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TBC1D3BA6NDS4 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
TBC1D3BA6NDS4 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
TBC1D3BA6NDS4 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
TBC1D3BA6NDS4 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
TBC1D3BA6NDS4 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
TBC1D3BA6NDS4 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
TBC1D3BA6NDS4 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TBC1D3BA6NDS4 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TBC1D3BA6NDS4 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
TBC1D3BA6NDS4 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
TBC1D3BA6NDS4 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
TBC1D3BA6NDS4 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
TBC1D3BA6NDS4 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC15.98■□□□□ 0.15
TBC1D3BA6NDS4 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC15.97■□□□□ 0.15
TBC1D3BA6NDS4 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TBC1D3BA6NDS4 AC134312.5-201ENST00000568031 1313 ntBASIC15.97■□□□□ 0.15
TBC1D3BA6NDS4 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC15.97■□□□□ 0.15
TBC1D3BA6NDS4 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TBC1D3BA6NDS4 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
TBC1D3BA6NDS4 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TBC1D3BA6NDS4 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TBC1D3BA6NDS4 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC15.97■□□□□ 0.15
TBC1D3BA6NDS4 AL596087.1-201ENST00000400979 1969 ntBASIC15.97■□□□□ 0.15
TBC1D3BA6NDS4 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC15.97■□□□□ 0.15
TBC1D3BA6NDS4 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC15.97■□□□□ 0.15
TBC1D3BA6NDS4 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC15.97■□□□□ 0.15
TBC1D3BA6NDS4 MFF-223ENST00000524634 647 ntTSL 2 BASIC15.97■□□□□ 0.15
TBC1D3BA6NDS4 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TBC1D3BA6NDS4 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC15.97■□□□□ 0.15
TBC1D3BA6NDS4 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TBC1D3BA6NDS4 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TBC1D3BA6NDS4 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC15.97■□□□□ 0.15
TBC1D3BA6NDS4 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TBC1D3BA6NDS4 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TBC1D3BA6NDS4 REXO1L6P-201ENST00000603433 1515 ntBASIC15.97■□□□□ 0.15
TBC1D3BA6NDS4 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
TBC1D3BA6NDS4 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TBC1D3BA6NDS4 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC15.97■□□□□ 0.15
TBC1D3BA6NDS4 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC15.97■□□□□ 0.15
TBC1D3BA6NDS4 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
TBC1D3BA6NDS4 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC15.97■□□□□ 0.15
TBC1D3BA6NDS4 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
TBC1D3BA6NDS4 ING5-213ENST00000636051 4199 ntTSL 5 BASIC15.97■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 59 ms