Protein–RNA interactions for Protein: Q9Y3E1

HDGFL3, Hepatoma-derived growth factor-related protein 3, humanhuman

Predictions only

Length 203 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3Q9Y3E1 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
HDGFL3Q9Y3E1 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC14.22□□□□□ -0.13
HDGFL3Q9Y3E1 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
HDGFL3Q9Y3E1 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HDGFL3Q9Y3E1 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
HDGFL3Q9Y3E1 AC068587.6-202ENST00000641839 5619 ntBASIC14.22□□□□□ -0.13
HDGFL3Q9Y3E1 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC14.22□□□□□ -0.13
HDGFL3Q9Y3E1 TKT-202ENST00000423516 2075 ntTSL 2 BASIC14.22□□□□□ -0.13
HDGFL3Q9Y3E1 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
HDGFL3Q9Y3E1 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HDGFL3Q9Y3E1 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC14.22□□□□□ -0.13
HDGFL3Q9Y3E1 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
HDGFL3Q9Y3E1 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
HDGFL3Q9Y3E1 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HDGFL3Q9Y3E1 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
HDGFL3Q9Y3E1 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HDGFL3Q9Y3E1 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC14.22□□□□□ -0.13
HDGFL3Q9Y3E1 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HDGFL3Q9Y3E1 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC14.22□□□□□ -0.13
HDGFL3Q9Y3E1 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
HDGFL3Q9Y3E1 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC14.22□□□□□ -0.13
HDGFL3Q9Y3E1 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
HDGFL3Q9Y3E1 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
HDGFL3Q9Y3E1 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
HDGFL3Q9Y3E1 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
HDGFL3Q9Y3E1 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
HDGFL3Q9Y3E1 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
HDGFL3Q9Y3E1 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
HDGFL3Q9Y3E1 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
HDGFL3Q9Y3E1 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
HDGFL3Q9Y3E1 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
HDGFL3Q9Y3E1 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
HDGFL3Q9Y3E1 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
HDGFL3Q9Y3E1 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC14.21□□□□□ -0.13
HDGFL3Q9Y3E1 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC14.21□□□□□ -0.13
HDGFL3Q9Y3E1 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC14.21□□□□□ -0.13
HDGFL3Q9Y3E1 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC14.21□□□□□ -0.13
HDGFL3Q9Y3E1 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC14.21□□□□□ -0.13
HDGFL3Q9Y3E1 USP40-206ENST00000443711 628 ntTSL 2 BASIC14.21□□□□□ -0.13
HDGFL3Q9Y3E1 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC14.21□□□□□ -0.13
HDGFL3Q9Y3E1 AC009477.1-201ENST00000452936 217 ntBASIC14.21□□□□□ -0.13
HDGFL3Q9Y3E1 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC14.21□□□□□ -0.13
HDGFL3Q9Y3E1 AC093214.1-201ENST00000511688 1107 ntBASIC14.21□□□□□ -0.13
HDGFL3Q9Y3E1 SLED1-202ENST00000512051 380 ntBASIC14.21□□□□□ -0.13
HDGFL3Q9Y3E1 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC14.21□□□□□ -0.13
HDGFL3Q9Y3E1 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC14.21□□□□□ -0.13
HDGFL3Q9Y3E1 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC14.21□□□□□ -0.13
HDGFL3Q9Y3E1 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC14.21□□□□□ -0.13
HDGFL3Q9Y3E1 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC14.21□□□□□ -0.13
HDGFL3Q9Y3E1 AL390955.2-201ENST00000603032 514 ntBASIC14.21□□□□□ -0.13
HDGFL3Q9Y3E1 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
HDGFL3Q9Y3E1 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
HDGFL3Q9Y3E1 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC14.21□□□□□ -0.13
HDGFL3Q9Y3E1 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
HDGFL3Q9Y3E1 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
HDGFL3Q9Y3E1 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
HDGFL3Q9Y3E1 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
HDGFL3Q9Y3E1 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
HDGFL3Q9Y3E1 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
HDGFL3Q9Y3E1 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC14.21□□□□□ -0.14
HDGFL3Q9Y3E1 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
HDGFL3Q9Y3E1 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC14.21□□□□□ -0.14
HDGFL3Q9Y3E1 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
HDGFL3Q9Y3E1 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
HDGFL3Q9Y3E1 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HDGFL3Q9Y3E1 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HDGFL3Q9Y3E1 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC14.2□□□□□ -0.14
HDGFL3Q9Y3E1 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC14.2□□□□□ -0.14
HDGFL3Q9Y3E1 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
HDGFL3Q9Y3E1 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC14.2□□□□□ -0.14
HDGFL3Q9Y3E1 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HDGFL3Q9Y3E1 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HDGFL3Q9Y3E1 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HDGFL3Q9Y3E1 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC14.2□□□□□ -0.14
HDGFL3Q9Y3E1 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HDGFL3Q9Y3E1 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HDGFL3Q9Y3E1 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC14.2□□□□□ -0.14
HDGFL3Q9Y3E1 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
HDGFL3Q9Y3E1 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
HDGFL3Q9Y3E1 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
HDGFL3Q9Y3E1 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
HDGFL3Q9Y3E1 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC14.2□□□□□ -0.14
HDGFL3Q9Y3E1 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC14.2□□□□□ -0.14
HDGFL3Q9Y3E1 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC14.2□□□□□ -0.14
HDGFL3Q9Y3E1 AC004890.2-204ENST00000481968 304 ntBASIC14.2□□□□□ -0.14
HDGFL3Q9Y3E1 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC14.2□□□□□ -0.14
HDGFL3Q9Y3E1 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC14.2□□□□□ -0.14
HDGFL3Q9Y3E1 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC14.2□□□□□ -0.14
HDGFL3Q9Y3E1 AQP6-203ENST00000551733 849 ntTSL 3 BASIC14.2□□□□□ -0.14
HDGFL3Q9Y3E1 CMC2-214ENST00000565925 640 ntTSL 5 BASIC14.2□□□□□ -0.14
HDGFL3Q9Y3E1 AC027796.2-201ENST00000575326 344 ntBASIC14.2□□□□□ -0.14
HDGFL3Q9Y3E1 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC14.2□□□□□ -0.14
HDGFL3Q9Y3E1 AC005498.2-205ENST00000593218 784 ntBASIC14.2□□□□□ -0.14
HDGFL3Q9Y3E1 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC14.2□□□□□ -0.14
HDGFL3Q9Y3E1 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
HDGFL3Q9Y3E1 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC14.2□□□□□ -0.14
HDGFL3Q9Y3E1 5S_rRNA.22-201ENST00000614916 106 ntBASIC14.2□□□□□ -0.14
HDGFL3Q9Y3E1 AL109936.8-201ENST00000641772 604 ntBASIC14.2□□□□□ -0.14
HDGFL3Q9Y3E1 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HDGFL3Q9Y3E1 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC14.2□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms