Protein–RNA interactions for Protein: Q9UKZ1

CNOT11, CCR4-NOT transcription complex subunit 11, humanhuman

Known RBP Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT11Q9UKZ1 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CNOT11Q9UKZ1 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC15.25■□□□□ 0.03
CNOT11Q9UKZ1 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC15.25■□□□□ 0.03
CNOT11Q9UKZ1 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CNOT11Q9UKZ1 CD99-202ENST00000381180 530 ntTSL 2 BASIC15.25■□□□□ 0.03
CNOT11Q9UKZ1 AC004461.1-201ENST00000412461 403 ntBASIC15.25■□□□□ 0.03
CNOT11Q9UKZ1 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CNOT11Q9UKZ1 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC15.25■□□□□ 0.03
CNOT11Q9UKZ1 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CNOT11Q9UKZ1 SPDYE11-202ENST00000450699 704 ntBASIC15.25■□□□□ 0.03
CNOT11Q9UKZ1 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC15.25■□□□□ 0.03
CNOT11Q9UKZ1 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC15.25■□□□□ 0.03
CNOT11Q9UKZ1 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CNOT11Q9UKZ1 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC15.25■□□□□ 0.03
CNOT11Q9UKZ1 INO80E-210ENST00000567705 880 ntTSL 3 BASIC15.25■□□□□ 0.03
CNOT11Q9UKZ1 SPDYE9P-201ENST00000570642 692 ntBASIC15.25■□□□□ 0.03
CNOT11Q9UKZ1 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC15.25■□□□□ 0.03
CNOT11Q9UKZ1 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CNOT11Q9UKZ1 SPDYE10P-202ENST00000612005 668 ntBASIC15.25■□□□□ 0.03
CNOT11Q9UKZ1 SPDYE8P-202ENST00000612377 668 ntBASIC15.25■□□□□ 0.03
CNOT11Q9UKZ1 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC15.25■□□□□ 0.03
CNOT11Q9UKZ1 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC15.25■□□□□ 0.03
CNOT11Q9UKZ1 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CNOT11Q9UKZ1 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
CNOT11Q9UKZ1 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CNOT11Q9UKZ1 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CNOT11Q9UKZ1 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
CNOT11Q9UKZ1 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
CNOT11Q9UKZ1 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CNOT11Q9UKZ1 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CNOT11Q9UKZ1 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CNOT11Q9UKZ1 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CNOT11Q9UKZ1 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
CNOT11Q9UKZ1 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CNOT11Q9UKZ1 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CNOT11Q9UKZ1 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC15.24■□□□□ 0.03
CNOT11Q9UKZ1 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
CNOT11Q9UKZ1 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CNOT11Q9UKZ1 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CNOT11Q9UKZ1 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CNOT11Q9UKZ1 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CNOT11Q9UKZ1 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CNOT11Q9UKZ1 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CNOT11Q9UKZ1 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
CNOT11Q9UKZ1 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC15.24■□□□□ 0.03
CNOT11Q9UKZ1 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CNOT11Q9UKZ1 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
CNOT11Q9UKZ1 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC15.24■□□□□ 0.03
CNOT11Q9UKZ1 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC15.24■□□□□ 0.03
CNOT11Q9UKZ1 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CNOT11Q9UKZ1 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CNOT11Q9UKZ1 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CNOT11Q9UKZ1 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CNOT11Q9UKZ1 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CNOT11Q9UKZ1 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC15.24■□□□□ 0.03
CNOT11Q9UKZ1 RN7SL589P-201ENST00000481268 310 ntBASIC15.24■□□□□ 0.03
CNOT11Q9UKZ1 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC15.24■□□□□ 0.03
CNOT11Q9UKZ1 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
CNOT11Q9UKZ1 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CNOT11Q9UKZ1 AC243562.1-201ENST00000560672 389 ntBASIC15.24■□□□□ 0.03
CNOT11Q9UKZ1 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
CNOT11Q9UKZ1 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC15.24■□□□□ 0.03
CNOT11Q9UKZ1 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CNOT11Q9UKZ1 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC15.24■□□□□ 0.03
CNOT11Q9UKZ1 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC15.24■□□□□ 0.03
CNOT11Q9UKZ1 METTL23-205ENST00000588302 925 ntTSL 5 BASIC15.24■□□□□ 0.03
CNOT11Q9UKZ1 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
CNOT11Q9UKZ1 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC15.24■□□□□ 0.03
CNOT11Q9UKZ1 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CNOT11Q9UKZ1 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC15.24■□□□□ 0.03
CNOT11Q9UKZ1 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC15.24■□□□□ 0.03
CNOT11Q9UKZ1 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC15.24■□□□□ 0.03
CNOT11Q9UKZ1 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CNOT11Q9UKZ1 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
CNOT11Q9UKZ1 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC15.24■□□□□ 0.03
CNOT11Q9UKZ1 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CNOT11Q9UKZ1 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
CNOT11Q9UKZ1 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CNOT11Q9UKZ1 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CNOT11Q9UKZ1 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC15.24■□□□□ 0.03
CNOT11Q9UKZ1 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC15.24■□□□□ 0.03
CNOT11Q9UKZ1 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC15.24■□□□□ 0.03
CNOT11Q9UKZ1 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC15.24■□□□□ 0.03
CNOT11Q9UKZ1 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC15.24■□□□□ 0.03
CNOT11Q9UKZ1 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
CNOT11Q9UKZ1 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC15.24■□□□□ 0.03
CNOT11Q9UKZ1 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CNOT11Q9UKZ1 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC15.23■□□□□ 0.03
CNOT11Q9UKZ1 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CNOT11Q9UKZ1 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
CNOT11Q9UKZ1 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC15.23■□□□□ 0.03
CNOT11Q9UKZ1 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
CNOT11Q9UKZ1 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CNOT11Q9UKZ1 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CNOT11Q9UKZ1 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CNOT11Q9UKZ1 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CNOT11Q9UKZ1 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC15.23■□□□□ 0.03
CNOT11Q9UKZ1 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC15.23■□□□□ 0.03
CNOT11Q9UKZ1 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CNOT11Q9UKZ1 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms