Protein–RNA interactions for Protein: Q9UHL9

GTF2IRD1, General transcription factor II-I repeat domain-containing protein 1, humanhuman

Predictions only

Length 959 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2IRD1Q9UHL9 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
GTF2IRD1Q9UHL9 SP100-205ENST00000409824 1802 ntTSL 5 BASIC17.23■□□□□ 0.35
GTF2IRD1Q9UHL9 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC17.23■□□□□ 0.35
GTF2IRD1Q9UHL9 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC17.23■□□□□ 0.35
GTF2IRD1Q9UHL9 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
GTF2IRD1Q9UHL9 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC17.23■□□□□ 0.35
GTF2IRD1Q9UHL9 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
GTF2IRD1Q9UHL9 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
GTF2IRD1Q9UHL9 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
GTF2IRD1Q9UHL9 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
GTF2IRD1Q9UHL9 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
GTF2IRD1Q9UHL9 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
GTF2IRD1Q9UHL9 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
GTF2IRD1Q9UHL9 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
GTF2IRD1Q9UHL9 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC17.22■□□□□ 0.35
GTF2IRD1Q9UHL9 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
GTF2IRD1Q9UHL9 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
GTF2IRD1Q9UHL9 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
GTF2IRD1Q9UHL9 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
GTF2IRD1Q9UHL9 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
GTF2IRD1Q9UHL9 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC17.22■□□□□ 0.35
GTF2IRD1Q9UHL9 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC17.22■□□□□ 0.35
GTF2IRD1Q9UHL9 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC17.22■□□□□ 0.35
GTF2IRD1Q9UHL9 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC17.22■□□□□ 0.35
GTF2IRD1Q9UHL9 AC078819.1-201ENST00000547454 765 ntBASIC17.22■□□□□ 0.35
GTF2IRD1Q9UHL9 AC012085.1-201ENST00000548270 765 ntBASIC17.22■□□□□ 0.35
GTF2IRD1Q9UHL9 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC17.22■□□□□ 0.35
GTF2IRD1Q9UHL9 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC17.22■□□□□ 0.35
GTF2IRD1Q9UHL9 UBL5-208ENST00000593087 320 ntTSL 3 BASIC17.22■□□□□ 0.35
GTF2IRD1Q9UHL9 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC17.22■□□□□ 0.35
GTF2IRD1Q9UHL9 AC145423.3-201ENST00000615987 467 ntBASIC17.22■□□□□ 0.35
GTF2IRD1Q9UHL9 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
GTF2IRD1Q9UHL9 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC17.22■□□□□ 0.35
GTF2IRD1Q9UHL9 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC17.22■□□□□ 0.35
GTF2IRD1Q9UHL9 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC17.22■□□□□ 0.35
GTF2IRD1Q9UHL9 AL138709.1-201ENST00000614840 1693 ntBASIC17.22■□□□□ 0.35
GTF2IRD1Q9UHL9 PGR-209ENST00000617858 2816 ntTSL 5 BASIC17.22■□□□□ 0.35
GTF2IRD1Q9UHL9 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC17.22■□□□□ 0.35
GTF2IRD1Q9UHL9 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
GTF2IRD1Q9UHL9 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
GTF2IRD1Q9UHL9 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
GTF2IRD1Q9UHL9 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
GTF2IRD1Q9UHL9 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
GTF2IRD1Q9UHL9 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC17.21■□□□□ 0.35
GTF2IRD1Q9UHL9 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC17.21■□□□□ 0.35
GTF2IRD1Q9UHL9 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
GTF2IRD1Q9UHL9 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
GTF2IRD1Q9UHL9 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
GTF2IRD1Q9UHL9 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC17.21■□□□□ 0.35
GTF2IRD1Q9UHL9 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
GTF2IRD1Q9UHL9 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
GTF2IRD1Q9UHL9 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
GTF2IRD1Q9UHL9 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
GTF2IRD1Q9UHL9 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
GTF2IRD1Q9UHL9 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
GTF2IRD1Q9UHL9 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
GTF2IRD1Q9UHL9 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
GTF2IRD1Q9UHL9 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC17.21■□□□□ 0.35
GTF2IRD1Q9UHL9 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC17.21■□□□□ 0.35
GTF2IRD1Q9UHL9 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC17.21■□□□□ 0.35
GTF2IRD1Q9UHL9 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
GTF2IRD1Q9UHL9 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
GTF2IRD1Q9UHL9 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
GTF2IRD1Q9UHL9 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
GTF2IRD1Q9UHL9 MIR1247-201ENST00000408206 136 ntBASIC17.21■□□□□ 0.35
GTF2IRD1Q9UHL9 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC17.21■□□□□ 0.35
GTF2IRD1Q9UHL9 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC17.21■□□□□ 0.35
GTF2IRD1Q9UHL9 AC245100.3-201ENST00000441281 285 ntBASIC17.21■□□□□ 0.35
GTF2IRD1Q9UHL9 FAM86HP-204ENST00000513466 959 ntBASIC17.21■□□□□ 0.35
GTF2IRD1Q9UHL9 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC17.21■□□□□ 0.35
GTF2IRD1Q9UHL9 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC17.21■□□□□ 0.35
GTF2IRD1Q9UHL9 AC243960.2-201ENST00000600996 747 ntBASIC17.21■□□□□ 0.35
GTF2IRD1Q9UHL9 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC17.21■□□□□ 0.35
GTF2IRD1Q9UHL9 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
GTF2IRD1Q9UHL9 AC091271.1-201ENST00000611877 1162 ntBASIC17.21■□□□□ 0.35
GTF2IRD1Q9UHL9 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC17.21■□□□□ 0.35
GTF2IRD1Q9UHL9 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
GTF2IRD1Q9UHL9 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC17.21■□□□□ 0.35
GTF2IRD1Q9UHL9 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
GTF2IRD1Q9UHL9 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
GTF2IRD1Q9UHL9 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
GTF2IRD1Q9UHL9 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
GTF2IRD1Q9UHL9 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
GTF2IRD1Q9UHL9 KRT8P35-201ENST00000483942 1338 ntBASIC17.21■□□□□ 0.34
GTF2IRD1Q9UHL9 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.34
GTF2IRD1Q9UHL9 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
GTF2IRD1Q9UHL9 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
GTF2IRD1Q9UHL9 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC17.2■□□□□ 0.34
GTF2IRD1Q9UHL9 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
GTF2IRD1Q9UHL9 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC17.2■□□□□ 0.34
GTF2IRD1Q9UHL9 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
GTF2IRD1Q9UHL9 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC17.2■□□□□ 0.34
GTF2IRD1Q9UHL9 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
GTF2IRD1Q9UHL9 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
GTF2IRD1Q9UHL9 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
GTF2IRD1Q9UHL9 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
GTF2IRD1Q9UHL9 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC17.2■□□□□ 0.34
GTF2IRD1Q9UHL9 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
GTF2IRD1Q9UHL9 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
GTF2IRD1Q9UHL9 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms