Protein–RNA interactions for Protein: Q9P0W2

HMG20B, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20BQ9P0W2 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HMG20BQ9P0W2 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC19.17■□□□□ 0.66
HMG20BQ9P0W2 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
HMG20BQ9P0W2 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HMG20BQ9P0W2 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC19.17■□□□□ 0.66
HMG20BQ9P0W2 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
HMG20BQ9P0W2 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
HMG20BQ9P0W2 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HMG20BQ9P0W2 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
HMG20BQ9P0W2 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC19.17■□□□□ 0.66
HMG20BQ9P0W2 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
HMG20BQ9P0W2 RAC2-202ENST00000401529 569 ntTSL 4 BASIC19.17■□□□□ 0.66
HMG20BQ9P0W2 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC19.17■□□□□ 0.66
HMG20BQ9P0W2 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HMG20BQ9P0W2 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
HMG20BQ9P0W2 RN7SL752P-201ENST00000463779 287 ntBASIC19.17■□□□□ 0.66
HMG20BQ9P0W2 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC19.17■□□□□ 0.66
HMG20BQ9P0W2 AC092552.1-201ENST00000547243 906 ntBASIC19.17■□□□□ 0.66
HMG20BQ9P0W2 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC19.17■□□□□ 0.66
HMG20BQ9P0W2 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
HMG20BQ9P0W2 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
HMG20BQ9P0W2 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC19.17■□□□□ 0.66
HMG20BQ9P0W2 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC19.17■□□□□ 0.66
HMG20BQ9P0W2 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
HMG20BQ9P0W2 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC19.17■□□□□ 0.66
HMG20BQ9P0W2 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HMG20BQ9P0W2 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HMG20BQ9P0W2 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC19.17■□□□□ 0.66
HMG20BQ9P0W2 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HMG20BQ9P0W2 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HMG20BQ9P0W2 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HMG20BQ9P0W2 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC19.16■□□□□ 0.66
HMG20BQ9P0W2 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC19.16■□□□□ 0.66
HMG20BQ9P0W2 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HMG20BQ9P0W2 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HMG20BQ9P0W2 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC19.16■□□□□ 0.66
HMG20BQ9P0W2 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
HMG20BQ9P0W2 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
HMG20BQ9P0W2 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC19.16■□□□□ 0.66
HMG20BQ9P0W2 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
HMG20BQ9P0W2 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC19.16■□□□□ 0.66
HMG20BQ9P0W2 PAUPAR-201ENST00000630360 2965 ntBASIC19.16■□□□□ 0.66
HMG20BQ9P0W2 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HMG20BQ9P0W2 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
HMG20BQ9P0W2 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC19.16■□□□□ 0.66
HMG20BQ9P0W2 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC19.16■□□□□ 0.66
HMG20BQ9P0W2 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC19.16■□□□□ 0.66
HMG20BQ9P0W2 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC19.16■□□□□ 0.66
HMG20BQ9P0W2 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC19.16■□□□□ 0.66
HMG20BQ9P0W2 AC132938.2-201ENST00000579188 680 ntBASIC19.16■□□□□ 0.66
HMG20BQ9P0W2 AL591163.1-201ENST00000641757 987 ntBASIC19.16■□□□□ 0.66
HMG20BQ9P0W2 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC19.16■□□□□ 0.66
HMG20BQ9P0W2 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HMG20BQ9P0W2 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
HMG20BQ9P0W2 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC19.16■□□□□ 0.66
HMG20BQ9P0W2 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HMG20BQ9P0W2 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC19.16■□□□□ 0.66
HMG20BQ9P0W2 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
HMG20BQ9P0W2 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HMG20BQ9P0W2 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
HMG20BQ9P0W2 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC19.15■□□□□ 0.66
HMG20BQ9P0W2 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
HMG20BQ9P0W2 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HMG20BQ9P0W2 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
HMG20BQ9P0W2 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
HMG20BQ9P0W2 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC19.15■□□□□ 0.66
HMG20BQ9P0W2 AC046158.3-201ENST00000624947 2558 ntBASIC19.15■□□□□ 0.66
HMG20BQ9P0W2 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HMG20BQ9P0W2 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
HMG20BQ9P0W2 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC19.15■□□□□ 0.66
HMG20BQ9P0W2 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC19.15■□□□□ 0.66
HMG20BQ9P0W2 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC19.15■□□□□ 0.66
HMG20BQ9P0W2 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
HMG20BQ9P0W2 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC19.15■□□□□ 0.66
HMG20BQ9P0W2 PKIG-203ENST00000372887 769 ntTSL 3 BASIC19.15■□□□□ 0.66
HMG20BQ9P0W2 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC19.15■□□□□ 0.66
HMG20BQ9P0W2 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC19.15■□□□□ 0.66
HMG20BQ9P0W2 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
HMG20BQ9P0W2 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC19.15■□□□□ 0.66
HMG20BQ9P0W2 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC19.15■□□□□ 0.66
HMG20BQ9P0W2 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC19.15■□□□□ 0.66
HMG20BQ9P0W2 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
HMG20BQ9P0W2 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC19.15■□□□□ 0.66
HMG20BQ9P0W2 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC19.15■□□□□ 0.66
HMG20BQ9P0W2 AC036164.1-201ENST00000570544 333 ntBASIC19.15■□□□□ 0.66
HMG20BQ9P0W2 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC19.15■□□□□ 0.66
HMG20BQ9P0W2 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC19.15■□□□□ 0.66
HMG20BQ9P0W2 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC19.15■□□□□ 0.66
HMG20BQ9P0W2 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC19.15■□□□□ 0.66
HMG20BQ9P0W2 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC19.15■□□□□ 0.66
HMG20BQ9P0W2 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
HMG20BQ9P0W2 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HMG20BQ9P0W2 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HMG20BQ9P0W2 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
HMG20BQ9P0W2 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HMG20BQ9P0W2 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HMG20BQ9P0W2 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC19.15■□□□□ 0.66
HMG20BQ9P0W2 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC19.15■□□□□ 0.66
HMG20BQ9P0W2 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
HMG20BQ9P0W2 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms