Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC18.85■□□□□ 0.61
RTN4Q9NQC3 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RTN4Q9NQC3 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RTN4Q9NQC3 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC18.85■□□□□ 0.61
RTN4Q9NQC3 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC18.85■□□□□ 0.61
RTN4Q9NQC3 AC026396.1-201ENST00000419388 421 ntBASIC18.85■□□□□ 0.61
RTN4Q9NQC3 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
RTN4Q9NQC3 UPF3AP2-201ENST00000457924 1132 ntBASIC18.85■□□□□ 0.61
RTN4Q9NQC3 AL671277.2-201ENST00000458060 996 ntBASIC18.85■□□□□ 0.61
RTN4Q9NQC3 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC18.85■□□□□ 0.61
RTN4Q9NQC3 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC18.85■□□□□ 0.61
RTN4Q9NQC3 AC004672.2-201ENST00000537181 574 ntTSL 2 BASIC18.85■□□□□ 0.61
RTN4Q9NQC3 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
RTN4Q9NQC3 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC18.85■□□□□ 0.61
RTN4Q9NQC3 IGHV3-41-201ENST00000613121 348 ntBASIC18.85■□□□□ 0.61
RTN4Q9NQC3 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC18.85■□□□□ 0.61
RTN4Q9NQC3 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RTN4Q9NQC3 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RTN4Q9NQC3 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RTN4Q9NQC3 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
RTN4Q9NQC3 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC18.85■□□□□ 0.61
RTN4Q9NQC3 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RTN4Q9NQC3 TVP23C-CDRT4-203ENST00000522212 2833 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
RTN4Q9NQC3 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC18.85■□□□□ 0.61
RTN4Q9NQC3 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
RTN4Q9NQC3 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RTN4Q9NQC3 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
RTN4Q9NQC3 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RTN4Q9NQC3 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RTN4Q9NQC3 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
RTN4Q9NQC3 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RTN4Q9NQC3 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RTN4Q9NQC3 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RTN4Q9NQC3 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
RTN4Q9NQC3 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC18.84■□□□□ 0.61
RTN4Q9NQC3 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RTN4Q9NQC3 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC18.84■□□□□ 0.61
RTN4Q9NQC3 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
RTN4Q9NQC3 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RTN4Q9NQC3 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
RTN4Q9NQC3 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC18.84■□□□□ 0.61
RTN4Q9NQC3 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RTN4Q9NQC3 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RTN4Q9NQC3 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
RTN4Q9NQC3 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC18.84■□□□□ 0.61
RTN4Q9NQC3 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
RTN4Q9NQC3 ST3GAL1-211ENST00000522652 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RTN4Q9NQC3 BAK1-202ENST00000374467 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RTN4Q9NQC3 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
RTN4Q9NQC3 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RTN4Q9NQC3 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC18.84■□□□□ 0.61
RTN4Q9NQC3 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC18.84■□□□□ 0.61
RTN4Q9NQC3 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
RTN4Q9NQC3 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC18.84■□□□□ 0.61
RTN4Q9NQC3 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RTN4Q9NQC3 AC115102.1-201ENST00000558044 487 ntTSL 5 BASIC18.84■□□□□ 0.61
RTN4Q9NQC3 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RTN4Q9NQC3 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
RTN4Q9NQC3 AC011498.5-201ENST00000592027 486 ntBASIC18.84■□□□□ 0.61
RTN4Q9NQC3 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
RTN4Q9NQC3 AD001527.2-201ENST00000622994 785 ntBASIC18.84■□□□□ 0.61
RTN4Q9NQC3 SFI1-229ENST00000540643 4226 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
RTN4Q9NQC3 CD34-203ENST00000367036 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
RTN4Q9NQC3 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RTN4Q9NQC3 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
RTN4Q9NQC3 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC18.84■□□□□ 0.61
RTN4Q9NQC3 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
RTN4Q9NQC3 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RTN4Q9NQC3 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
RTN4Q9NQC3 AC113189.2-201ENST00000575310 1975 ntTSL 2 BASIC18.84■□□□□ 0.61
RTN4Q9NQC3 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC18.84■□□□□ 0.61
RTN4Q9NQC3 REV1-202ENST00000393445 4686 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RTN4Q9NQC3 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RTN4Q9NQC3 AC114689.3-201ENST00000583687 2991 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RTN4Q9NQC3 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RTN4Q9NQC3 PIAS1-202ENST00000545237 2932 ntTSL 2 BASIC18.84■□□□□ 0.61
RTN4Q9NQC3 ZNF23-203ENST00000393539 3242 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
RTN4Q9NQC3 NALCN-AS1-201ENST00000457843 2846 ntTSL 2 BASIC18.83■□□□□ 0.61
RTN4Q9NQC3 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
RTN4Q9NQC3 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
RTN4Q9NQC3 TOE1-201ENST00000372090 2389 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
RTN4Q9NQC3 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
RTN4Q9NQC3 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
RTN4Q9NQC3 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
RTN4Q9NQC3 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC18.83■□□□□ 0.61
RTN4Q9NQC3 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
RTN4Q9NQC3 MTF2-202ENST00000370303 1951 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
RTN4Q9NQC3 REXO1L1P-202ENST00000608646 1974 ntBASIC18.83■□□□□ 0.61
RTN4Q9NQC3 PLEKHG2-206ENST00000458508 3898 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.61
RTN4Q9NQC3 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC18.83■□□□□ 0.6
RTN4Q9NQC3 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RTN4Q9NQC3 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC18.83■□□□□ 0.6
RTN4Q9NQC3 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RTN4Q9NQC3 RPS20P25-201ENST00000412447 352 ntBASIC18.83■□□□□ 0.6
RTN4Q9NQC3 LINC02243-201ENST00000441841 961 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
RTN4Q9NQC3 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC18.83■□□□□ 0.6
RTN4Q9NQC3 LINC02083-201ENST00000462835 515 ntTSL 3 BASIC18.83■□□□□ 0.6
RTN4Q9NQC3 RN7SL519P-201ENST00000497925 288 ntBASIC18.83■□□□□ 0.6
RTN4Q9NQC3 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC18.83■□□□□ 0.6
RTN4Q9NQC3 NDUFV2-AS1-203ENST00000608008 779 ntBASIC18.83■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 62 ms