Protein–RNA interactions for Protein: Q9HD90

NEUROD4, Neurogenic differentiation factor 4, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEUROD4Q9HD90 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
NEUROD4Q9HD90 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC14.98□□□□□ -0.01
NEUROD4Q9HD90 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
NEUROD4Q9HD90 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
NEUROD4Q9HD90 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC14.98□□□□□ -0.01
NEUROD4Q9HD90 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
NEUROD4Q9HD90 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
NEUROD4Q9HD90 MYB-201ENST00000316528 3571 ntTSL 5 BASIC14.98□□□□□ -0.01
NEUROD4Q9HD90 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
NEUROD4Q9HD90 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC14.98□□□□□ -0.01
NEUROD4Q9HD90 MYB-241ENST00000616088 3573 ntTSL 5 BASIC14.98□□□□□ -0.01
NEUROD4Q9HD90 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NEUROD4Q9HD90 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
NEUROD4Q9HD90 MYB-242ENST00000618728 3545 ntTSL 5 BASIC14.97□□□□□ -0.01
NEUROD4Q9HD90 AC023157.3-201ENST00000619086 2088 ntBASIC14.97□□□□□ -0.01
NEUROD4Q9HD90 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
NEUROD4Q9HD90 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC14.97□□□□□ -0.01
NEUROD4Q9HD90 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC14.97□□□□□ -0.01
NEUROD4Q9HD90 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
NEUROD4Q9HD90 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
NEUROD4Q9HD90 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
NEUROD4Q9HD90 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC14.97□□□□□ -0.01
NEUROD4Q9HD90 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
NEUROD4Q9HD90 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
NEUROD4Q9HD90 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NEUROD4Q9HD90 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC14.97□□□□□ -0.01
NEUROD4Q9HD90 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NEUROD4Q9HD90 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
NEUROD4Q9HD90 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC14.97□□□□□ -0.01
NEUROD4Q9HD90 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NEUROD4Q9HD90 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NEUROD4Q9HD90 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NEUROD4Q9HD90 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NEUROD4Q9HD90 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC14.97□□□□□ -0.01
NEUROD4Q9HD90 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC14.97□□□□□ -0.01
NEUROD4Q9HD90 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
NEUROD4Q9HD90 ELP6-209ENST00000446787 894 ntTSL 3 BASIC14.97□□□□□ -0.01
NEUROD4Q9HD90 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC14.97□□□□□ -0.01
NEUROD4Q9HD90 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC14.97□□□□□ -0.01
NEUROD4Q9HD90 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC14.97□□□□□ -0.01
NEUROD4Q9HD90 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC14.97□□□□□ -0.01
NEUROD4Q9HD90 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC14.97□□□□□ -0.01
NEUROD4Q9HD90 AC106028.4-201ENST00000614509 607 ntBASIC14.97□□□□□ -0.01
NEUROD4Q9HD90 AL513210.1-201ENST00000629608 234 ntBASIC14.97□□□□□ -0.01
NEUROD4Q9HD90 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC14.97□□□□□ -0.01
NEUROD4Q9HD90 AC105339.1-204ENST00000636249 355 ntBASIC14.97□□□□□ -0.01
NEUROD4Q9HD90 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC14.97□□□□□ -0.01
NEUROD4Q9HD90 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
NEUROD4Q9HD90 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
NEUROD4Q9HD90 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
NEUROD4Q9HD90 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC14.97□□□□□ -0.01
NEUROD4Q9HD90 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NEUROD4Q9HD90 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC14.97□□□□□ -0.01
NEUROD4Q9HD90 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NEUROD4Q9HD90 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NEUROD4Q9HD90 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
NEUROD4Q9HD90 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
NEUROD4Q9HD90 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
NEUROD4Q9HD90 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NEUROD4Q9HD90 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
NEUROD4Q9HD90 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
NEUROD4Q9HD90 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
NEUROD4Q9HD90 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
NEUROD4Q9HD90 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
NEUROD4Q9HD90 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC14.97□□□□□ -0.01
NEUROD4Q9HD90 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC14.97□□□□□ -0.01
NEUROD4Q9HD90 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
NEUROD4Q9HD90 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
NEUROD4Q9HD90 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
NEUROD4Q9HD90 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
NEUROD4Q9HD90 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
NEUROD4Q9HD90 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
NEUROD4Q9HD90 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
NEUROD4Q9HD90 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC14.96□□□□□ -0.01
NEUROD4Q9HD90 KRT18P32-201ENST00000424695 1287 ntBASIC14.96□□□□□ -0.01
NEUROD4Q9HD90 WDR53-203ENST00000429115 683 ntTSL 2 BASIC14.96□□□□□ -0.01
NEUROD4Q9HD90 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
NEUROD4Q9HD90 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC14.96□□□□□ -0.01
NEUROD4Q9HD90 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC14.96□□□□□ -0.01
NEUROD4Q9HD90 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC14.96□□□□□ -0.01
NEUROD4Q9HD90 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
NEUROD4Q9HD90 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
NEUROD4Q9HD90 RN7SL371P-201ENST00000578099 267 ntBASIC14.96□□□□□ -0.01
NEUROD4Q9HD90 MIR4313-201ENST00000580760 101 ntBASIC14.96□□□□□ -0.01
NEUROD4Q9HD90 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
NEUROD4Q9HD90 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC14.96□□□□□ -0.01
NEUROD4Q9HD90 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
NEUROD4Q9HD90 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC14.96□□□□□ -0.01
NEUROD4Q9HD90 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
NEUROD4Q9HD90 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
NEUROD4Q9HD90 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
NEUROD4Q9HD90 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
NEUROD4Q9HD90 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
NEUROD4Q9HD90 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
NEUROD4Q9HD90 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.02
NEUROD4Q9HD90 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC14.96□□□□□ -0.02
NEUROD4Q9HD90 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC14.96□□□□□ -0.02
NEUROD4Q9HD90 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC14.96□□□□□ -0.02
NEUROD4Q9HD90 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC14.96□□□□□ -0.02
NEUROD4Q9HD90 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC14.96□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms