Protein–RNA interactions for Protein: Q9HCJ6

VAT1L, Synaptic vesicle membrane protein VAT-1 homolog-like, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1LQ9HCJ6 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
VAT1LQ9HCJ6 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
VAT1LQ9HCJ6 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
VAT1LQ9HCJ6 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC18.3■□□□□ 0.52
VAT1LQ9HCJ6 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
VAT1LQ9HCJ6 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
VAT1LQ9HCJ6 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC18.3■□□□□ 0.52
VAT1LQ9HCJ6 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
VAT1LQ9HCJ6 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC18.3■□□□□ 0.52
VAT1LQ9HCJ6 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC18.3■□□□□ 0.52
VAT1LQ9HCJ6 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
VAT1LQ9HCJ6 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
VAT1LQ9HCJ6 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
VAT1LQ9HCJ6 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
VAT1LQ9HCJ6 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
VAT1LQ9HCJ6 DGCR5-201ENST00000399539 862 ntBASIC18.3■□□□□ 0.52
VAT1LQ9HCJ6 AC087499.6-201ENST00000411576 835 ntBASIC18.3■□□□□ 0.52
VAT1LQ9HCJ6 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
VAT1LQ9HCJ6 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC18.3■□□□□ 0.52
VAT1LQ9HCJ6 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
VAT1LQ9HCJ6 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC18.3■□□□□ 0.52
VAT1LQ9HCJ6 AC027307.3-201ENST00000594262 1100 ntBASIC18.3■□□□□ 0.52
VAT1LQ9HCJ6 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
VAT1LQ9HCJ6 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
VAT1LQ9HCJ6 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC18.3■□□□□ 0.52
VAT1LQ9HCJ6 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC18.3■□□□□ 0.52
VAT1LQ9HCJ6 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC18.3■□□□□ 0.52
VAT1LQ9HCJ6 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC18.3■□□□□ 0.52
VAT1LQ9HCJ6 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
VAT1LQ9HCJ6 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
VAT1LQ9HCJ6 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
VAT1LQ9HCJ6 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
VAT1LQ9HCJ6 FLII-221ENST00000578558 2377 ntTSL 5 BASIC18.3■□□□□ 0.52
VAT1LQ9HCJ6 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
VAT1LQ9HCJ6 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC18.3■□□□□ 0.52
VAT1LQ9HCJ6 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
VAT1LQ9HCJ6 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
VAT1LQ9HCJ6 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC18.29■□□□□ 0.52
VAT1LQ9HCJ6 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC18.29■□□□□ 0.52
VAT1LQ9HCJ6 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
VAT1LQ9HCJ6 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC18.29■□□□□ 0.52
VAT1LQ9HCJ6 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
VAT1LQ9HCJ6 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
VAT1LQ9HCJ6 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
VAT1LQ9HCJ6 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
VAT1LQ9HCJ6 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC18.29■□□□□ 0.52
VAT1LQ9HCJ6 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
VAT1LQ9HCJ6 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
VAT1LQ9HCJ6 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC18.29■□□□□ 0.52
VAT1LQ9HCJ6 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC18.29■□□□□ 0.52
VAT1LQ9HCJ6 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
VAT1LQ9HCJ6 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
VAT1LQ9HCJ6 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC18.29■□□□□ 0.52
VAT1LQ9HCJ6 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC18.29■□□□□ 0.52
VAT1LQ9HCJ6 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
VAT1LQ9HCJ6 AC140912.1-201ENST00000577171 1054 ntBASIC18.29■□□□□ 0.52
VAT1LQ9HCJ6 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC18.29■□□□□ 0.52
VAT1LQ9HCJ6 AC007431.3-201ENST00000623221 587 ntBASIC18.29■□□□□ 0.52
VAT1LQ9HCJ6 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
VAT1LQ9HCJ6 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
VAT1LQ9HCJ6 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
VAT1LQ9HCJ6 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
VAT1LQ9HCJ6 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
VAT1LQ9HCJ6 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
VAT1LQ9HCJ6 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC18.29■□□□□ 0.52
VAT1LQ9HCJ6 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
VAT1LQ9HCJ6 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
VAT1LQ9HCJ6 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
VAT1LQ9HCJ6 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
VAT1LQ9HCJ6 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC18.28■□□□□ 0.52
VAT1LQ9HCJ6 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC18.28■□□□□ 0.52
VAT1LQ9HCJ6 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
VAT1LQ9HCJ6 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
VAT1LQ9HCJ6 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC18.28■□□□□ 0.52
VAT1LQ9HCJ6 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC18.28■□□□□ 0.52
VAT1LQ9HCJ6 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC18.28■□□□□ 0.52
VAT1LQ9HCJ6 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
VAT1LQ9HCJ6 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC18.28■□□□□ 0.52
VAT1LQ9HCJ6 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
VAT1LQ9HCJ6 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC18.28■□□□□ 0.52
VAT1LQ9HCJ6 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
VAT1LQ9HCJ6 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
VAT1LQ9HCJ6 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
VAT1LQ9HCJ6 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC18.28■□□□□ 0.52
VAT1LQ9HCJ6 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
VAT1LQ9HCJ6 AC098850.1-201ENST00000419919 790 ntBASIC18.28■□□□□ 0.52
VAT1LQ9HCJ6 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC18.28■□□□□ 0.52
VAT1LQ9HCJ6 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC18.28■□□□□ 0.52
VAT1LQ9HCJ6 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
VAT1LQ9HCJ6 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
VAT1LQ9HCJ6 FADS2-205ENST00000517839 469 ntTSL 3 BASIC18.28■□□□□ 0.52
VAT1LQ9HCJ6 AC055876.2-201ENST00000531834 546 ntBASIC18.28■□□□□ 0.52
VAT1LQ9HCJ6 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC18.28■□□□□ 0.52
VAT1LQ9HCJ6 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC18.28■□□□□ 0.52
VAT1LQ9HCJ6 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC18.28■□□□□ 0.52
VAT1LQ9HCJ6 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC18.28■□□□□ 0.52
VAT1LQ9HCJ6 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
VAT1LQ9HCJ6 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
VAT1LQ9HCJ6 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
VAT1LQ9HCJ6 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms