Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 COQ6-210ENST00000554920 649 ntTSL 3 BASIC13.24□□□□□ -0.29
SSBP3Q9BWW4 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
SSBP3Q9BWW4 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC13.24□□□□□ -0.29
SSBP3Q9BWW4 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC13.24□□□□□ -0.29
SSBP3Q9BWW4 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
SSBP3Q9BWW4 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC13.24□□□□□ -0.29
SSBP3Q9BWW4 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SSBP3Q9BWW4 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SSBP3Q9BWW4 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
SSBP3Q9BWW4 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
SSBP3Q9BWW4 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
SSBP3Q9BWW4 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
SSBP3Q9BWW4 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
SSBP3Q9BWW4 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC13.24□□□□□ -0.29
SSBP3Q9BWW4 SLC9A7P1-201ENST00000554295 3311 ntBASIC13.24□□□□□ -0.29
SSBP3Q9BWW4 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
SSBP3Q9BWW4 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
SSBP3Q9BWW4 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
SSBP3Q9BWW4 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SSBP3Q9BWW4 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SSBP3Q9BWW4 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC13.24□□□□□ -0.29
SSBP3Q9BWW4 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SSBP3Q9BWW4 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC13.23□□□□□ -0.29
SSBP3Q9BWW4 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC13.23□□□□□ -0.29
SSBP3Q9BWW4 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SSBP3Q9BWW4 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
SSBP3Q9BWW4 AC134407.2-201ENST00000625089 1978 ntBASIC13.23□□□□□ -0.29
SSBP3Q9BWW4 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SSBP3Q9BWW4 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
SSBP3Q9BWW4 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
SSBP3Q9BWW4 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
SSBP3Q9BWW4 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
SSBP3Q9BWW4 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SSBP3Q9BWW4 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SSBP3Q9BWW4 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
SSBP3Q9BWW4 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
SSBP3Q9BWW4 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC13.23□□□□□ -0.29
SSBP3Q9BWW4 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
SSBP3Q9BWW4 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
SSBP3Q9BWW4 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
SSBP3Q9BWW4 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC13.23□□□□□ -0.29
SSBP3Q9BWW4 CALY-202ENST00000368555 783 ntTSL 2 BASIC13.23□□□□□ -0.29
SSBP3Q9BWW4 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SSBP3Q9BWW4 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SSBP3Q9BWW4 OSM-203ENST00000403463 464 ntTSL 3 BASIC13.23□□□□□ -0.29
SSBP3Q9BWW4 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC13.23□□□□□ -0.29
SSBP3Q9BWW4 RASL12-203ENST00000434605 982 ntTSL 2 BASIC13.23□□□□□ -0.29
SSBP3Q9BWW4 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC13.23□□□□□ -0.29
SSBP3Q9BWW4 CRB3P1-201ENST00000449338 276 ntBASIC13.23□□□□□ -0.29
SSBP3Q9BWW4 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC13.23□□□□□ -0.29
SSBP3Q9BWW4 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC13.23□□□□□ -0.29
SSBP3Q9BWW4 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC13.23□□□□□ -0.29
SSBP3Q9BWW4 AC025048.3-201ENST00000590609 569 ntBASIC13.23□□□□□ -0.29
SSBP3Q9BWW4 AL132655.2-201ENST00000596276 594 ntBASIC13.23□□□□□ -0.29
SSBP3Q9BWW4 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
SSBP3Q9BWW4 AC005702.4-201ENST00000618393 416 ntBASIC13.23□□□□□ -0.29
SSBP3Q9BWW4 AC004461.2-201ENST00000629517 803 ntBASIC13.23□□□□□ -0.29
SSBP3Q9BWW4 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC13.23□□□□□ -0.29
SSBP3Q9BWW4 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SSBP3Q9BWW4 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SSBP3Q9BWW4 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC13.23□□□□□ -0.29
SSBP3Q9BWW4 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SSBP3Q9BWW4 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SSBP3Q9BWW4 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SSBP3Q9BWW4 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
SSBP3Q9BWW4 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
SSBP3Q9BWW4 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
SSBP3Q9BWW4 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC13.23□□□□□ -0.29
SSBP3Q9BWW4 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SSBP3Q9BWW4 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
SSBP3Q9BWW4 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SSBP3Q9BWW4 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
SSBP3Q9BWW4 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SSBP3Q9BWW4 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
SSBP3Q9BWW4 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC13.23□□□□□ -0.29
SSBP3Q9BWW4 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SSBP3Q9BWW4 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SSBP3Q9BWW4 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
SSBP3Q9BWW4 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SSBP3Q9BWW4 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
SSBP3Q9BWW4 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
SSBP3Q9BWW4 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SSBP3Q9BWW4 AC092850.2-201ENST00000623821 2697 ntBASIC13.22□□□□□ -0.29
SSBP3Q9BWW4 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
SSBP3Q9BWW4 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
SSBP3Q9BWW4 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
SSBP3Q9BWW4 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
SSBP3Q9BWW4 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC13.22□□□□□ -0.29
SSBP3Q9BWW4 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC13.22□□□□□ -0.29
SSBP3Q9BWW4 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
SSBP3Q9BWW4 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SSBP3Q9BWW4 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
SSBP3Q9BWW4 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
SSBP3Q9BWW4 SPDYE19P-201ENST00000338590 713 ntBASIC13.22□□□□□ -0.29
SSBP3Q9BWW4 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC13.22□□□□□ -0.29
SSBP3Q9BWW4 EDF1-203ENST00000371649 790 ntTSL 2 BASIC13.22□□□□□ -0.29
SSBP3Q9BWW4 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
SSBP3Q9BWW4 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
SSBP3Q9BWW4 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
SSBP3Q9BWW4 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms