Protein–RNA interactions for Protein: Q9BU40

CHRDL1, Chordin-like protein 1, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL1Q9BU40 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC12.65□□□□□ -0.38
CHRDL1Q9BU40 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
CHRDL1Q9BU40 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
CHRDL1Q9BU40 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC12.65□□□□□ -0.38
CHRDL1Q9BU40 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CHRDL1Q9BU40 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
CHRDL1Q9BU40 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC12.65□□□□□ -0.38
CHRDL1Q9BU40 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CHRDL1Q9BU40 RALGAPA1-201ENST00000307138 7911 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CHRDL1Q9BU40 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
CHRDL1Q9BU40 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CHRDL1Q9BU40 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CHRDL1Q9BU40 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC12.65□□□□□ -0.38
CHRDL1Q9BU40 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CHRDL1Q9BU40 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC12.65□□□□□ -0.38
CHRDL1Q9BU40 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
CHRDL1Q9BU40 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
CHRDL1Q9BU40 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CHRDL1Q9BU40 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC12.65□□□□□ -0.38
CHRDL1Q9BU40 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CHRDL1Q9BU40 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC12.65□□□□□ -0.38
CHRDL1Q9BU40 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.39
CHRDL1Q9BU40 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.39
CHRDL1Q9BU40 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.39
CHRDL1Q9BU40 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
CHRDL1Q9BU40 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC12.64□□□□□ -0.39
CHRDL1Q9BU40 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CHRDL1Q9BU40 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC12.64□□□□□ -0.39
CHRDL1Q9BU40 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
CHRDL1Q9BU40 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CHRDL1Q9BU40 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CHRDL1Q9BU40 AC104581.4-201ENST00000623126 3052 ntBASIC12.64□□□□□ -0.39
CHRDL1Q9BU40 LINC02447-202ENST00000501888 2146 ntBASIC12.64□□□□□ -0.39
CHRDL1Q9BU40 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CHRDL1Q9BU40 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
CHRDL1Q9BU40 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC12.64□□□□□ -0.39
CHRDL1Q9BU40 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC12.64□□□□□ -0.39
CHRDL1Q9BU40 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CHRDL1Q9BU40 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CHRDL1Q9BU40 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CHRDL1Q9BU40 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
CHRDL1Q9BU40 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CHRDL1Q9BU40 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CHRDL1Q9BU40 MIR648-201ENST00000385046 94 ntBASIC12.64□□□□□ -0.39
CHRDL1Q9BU40 MIR574-201ENST00000385209 96 ntBASIC12.64□□□□□ -0.39
CHRDL1Q9BU40 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC12.64□□□□□ -0.39
CHRDL1Q9BU40 POLD2P1-201ENST00000511220 997 ntBASIC12.64□□□□□ -0.39
CHRDL1Q9BU40 PRYP6-201ENST00000514804 343 ntBASIC12.64□□□□□ -0.39
CHRDL1Q9BU40 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC12.64□□□□□ -0.39
CHRDL1Q9BU40 KRT18P58-201ENST00000527480 1120 ntBASIC12.64□□□□□ -0.39
CHRDL1Q9BU40 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC12.64□□□□□ -0.39
CHRDL1Q9BU40 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CHRDL1Q9BU40 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC12.64□□□□□ -0.39
CHRDL1Q9BU40 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC12.64□□□□□ -0.39
CHRDL1Q9BU40 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC12.64□□□□□ -0.39
CHRDL1Q9BU40 AC091812.2-201ENST00000619081 385 ntBASIC12.64□□□□□ -0.39
CHRDL1Q9BU40 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CHRDL1Q9BU40 CDC14C-201ENST00000428251 1719 ntBASIC12.64□□□□□ -0.39
CHRDL1Q9BU40 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CHRDL1Q9BU40 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
CHRDL1Q9BU40 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
CHRDL1Q9BU40 TNRC18P2-201ENST00000417666 2714 ntBASIC12.64□□□□□ -0.39
CHRDL1Q9BU40 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CHRDL1Q9BU40 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CHRDL1Q9BU40 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
CHRDL1Q9BU40 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC12.64□□□□□ -0.39
CHRDL1Q9BU40 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC12.64□□□□□ -0.39
CHRDL1Q9BU40 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CHRDL1Q9BU40 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC12.64□□□□□ -0.39
CHRDL1Q9BU40 ANKRD11-201ENST00000301030 9301 ntAPPRIS P2 TSL 5 BASIC12.64□□□□□ -0.39
CHRDL1Q9BU40 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CHRDL1Q9BU40 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
CHRDL1Q9BU40 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
CHRDL1Q9BU40 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CHRDL1Q9BU40 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC12.64□□□□□ -0.39
CHRDL1Q9BU40 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
CHRDL1Q9BU40 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CHRDL1Q9BU40 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC12.63□□□□□ -0.39
CHRDL1Q9BU40 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CHRDL1Q9BU40 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC12.63□□□□□ -0.39
CHRDL1Q9BU40 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
CHRDL1Q9BU40 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CHRDL1Q9BU40 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CHRDL1Q9BU40 WAPL-201ENST00000263070 5987 ntTSL 5 BASIC12.63□□□□□ -0.39
CHRDL1Q9BU40 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
CHRDL1Q9BU40 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC12.63□□□□□ -0.39
CHRDL1Q9BU40 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC12.63□□□□□ -0.39
CHRDL1Q9BU40 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CHRDL1Q9BU40 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CHRDL1Q9BU40 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
CHRDL1Q9BU40 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CHRDL1Q9BU40 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CHRDL1Q9BU40 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CHRDL1Q9BU40 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC12.63□□□□□ -0.39
CHRDL1Q9BU40 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
CHRDL1Q9BU40 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CHRDL1Q9BU40 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC12.63□□□□□ -0.39
CHRDL1Q9BU40 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
CHRDL1Q9BU40 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CHRDL1Q9BU40 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC12.63□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms