Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 AC097065.1-201ENST00000425737 517 ntBASIC17.01■□□□□ 0.31
LRCH3Q96II8 HNRNPA1P63-201ENST00000427917 963 ntBASIC17.01■□□□□ 0.31
LRCH3Q96II8 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC17.01■□□□□ 0.31
LRCH3Q96II8 SERPINA13P-202ENST00000478994 924 ntBASIC17.01■□□□□ 0.31
LRCH3Q96II8 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC17.01■□□□□ 0.31
LRCH3Q96II8 NDUFC2-KCTD14-202ENST00000530054 656 ntAPPRIS P3 TSL 2 BASIC17.01■□□□□ 0.31
LRCH3Q96II8 AL390728.6-201ENST00000566446 1246 ntBASIC17.01■□□□□ 0.31
LRCH3Q96II8 AIPL1-211ENST00000576776 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
LRCH3Q96II8 AC068025.1-201ENST00000577218 762 ntTSL 3 BASIC17.01■□□□□ 0.31
LRCH3Q96II8 AC011462.2-201ENST00000598887 344 ntTSL 5 BASIC17.01■□□□□ 0.31
LRCH3Q96II8 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC17.01■□□□□ 0.31
LRCH3Q96II8 AL031665.1-201ENST00000619766 572 ntTSL 4 BASIC17.01■□□□□ 0.31
LRCH3Q96II8 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LRCH3Q96II8 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
LRCH3Q96II8 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LRCH3Q96II8 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LRCH3Q96II8 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
LRCH3Q96II8 AC093525.9-201ENST00000624961 1746 ntBASIC17.01■□□□□ 0.31
LRCH3Q96II8 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LRCH3Q96II8 REXO1L8P-201ENST00000604378 1897 ntBASIC17.01■□□□□ 0.31
LRCH3Q96II8 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LRCH3Q96II8 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LRCH3Q96II8 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LRCH3Q96II8 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
LRCH3Q96II8 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
LRCH3Q96II8 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
LRCH3Q96II8 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC17■□□□□ 0.31
LRCH3Q96II8 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LRCH3Q96II8 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
LRCH3Q96II8 CA12-203ENST00000422263 2556 ntTSL 2 BASIC17■□□□□ 0.31
LRCH3Q96II8 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LRCH3Q96II8 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC17■□□□□ 0.31
LRCH3Q96II8 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC17■□□□□ 0.31
LRCH3Q96II8 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
LRCH3Q96II8 NR0B2-201ENST00000254227 1156 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LRCH3Q96II8 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LRCH3Q96II8 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
LRCH3Q96II8 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LRCH3Q96II8 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC17■□□□□ 0.31
LRCH3Q96II8 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC17■□□□□ 0.31
LRCH3Q96II8 AC004973.1-201ENST00000413240 635 ntTSL 3 BASIC17■□□□□ 0.31
LRCH3Q96II8 AC012618.1-201ENST00000461223 412 ntBASIC17■□□□□ 0.31
LRCH3Q96II8 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC17■□□□□ 0.31
LRCH3Q96II8 AC010234.1-201ENST00000494599 870 ntBASIC17■□□□□ 0.31
LRCH3Q96II8 OSMR-AS1-202ENST00000512519 837 ntTSL 2 BASIC17■□□□□ 0.31
LRCH3Q96II8 ORAOV1-209ENST00000538554 1000 ntTSL 2 BASIC17■□□□□ 0.31
LRCH3Q96II8 FKBP11-212ENST00000552878 1052 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
LRCH3Q96II8 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC17■□□□□ 0.31
LRCH3Q96II8 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC17■□□□□ 0.31
LRCH3Q96II8 WT1-AS_6.1-201ENST00000614919 121 ntBASIC17■□□□□ 0.31
LRCH3Q96II8 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC17■□□□□ 0.31
LRCH3Q96II8 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
LRCH3Q96II8 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC17■□□□□ 0.31
LRCH3Q96II8 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC17■□□□□ 0.31
LRCH3Q96II8 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
LRCH3Q96II8 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
LRCH3Q96II8 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC17■□□□□ 0.31
LRCH3Q96II8 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC17■□□□□ 0.31
LRCH3Q96II8 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LRCH3Q96II8 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LRCH3Q96II8 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC17■□□□□ 0.31
LRCH3Q96II8 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LRCH3Q96II8 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LRCH3Q96II8 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC17■□□□□ 0.31
LRCH3Q96II8 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
LRCH3Q96II8 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LRCH3Q96II8 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
LRCH3Q96II8 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
LRCH3Q96II8 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC16.99■□□□□ 0.31
LRCH3Q96II8 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
LRCH3Q96II8 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC16.99■□□□□ 0.31
LRCH3Q96II8 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
LRCH3Q96II8 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC16.99■□□□□ 0.31
LRCH3Q96II8 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
LRCH3Q96II8 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
LRCH3Q96II8 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
LRCH3Q96II8 KRT8P39-201ENST00000396270 1433 ntBASIC16.99■□□□□ 0.31
LRCH3Q96II8 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
LRCH3Q96II8 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC16.99■□□□□ 0.31
LRCH3Q96II8 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
LRCH3Q96II8 MRPS22-201ENST00000310776 1120 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
LRCH3Q96II8 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
LRCH3Q96II8 CNR1-201ENST00000362094 1252 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
LRCH3Q96II8 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
LRCH3Q96II8 MYL3-202ENST00000395869 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
LRCH3Q96II8 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC16.99■□□□□ 0.31
LRCH3Q96II8 RPSAP31-201ENST00000416648 895 ntBASIC16.99■□□□□ 0.31
LRCH3Q96II8 IDI2-AS1-201ENST00000420381 672 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
LRCH3Q96II8 FAU-202ENST00000434372 533 ntTSL 2 BASIC16.99■□□□□ 0.31
LRCH3Q96II8 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
LRCH3Q96II8 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC16.99■□□□□ 0.31
LRCH3Q96II8 PAM16-215ENST00000577031 548 ntTSL 4 BASIC16.99■□□□□ 0.31
LRCH3Q96II8 KSR1-207ENST00000578981 748 ntTSL 4 BASIC16.99■□□□□ 0.31
LRCH3Q96II8 DGAT2L7P-201ENST00000602462 744 ntBASIC16.99■□□□□ 0.31
LRCH3Q96II8 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC16.99■□□□□ 0.31
LRCH3Q96II8 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
LRCH3Q96II8 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
LRCH3Q96II8 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
LRCH3Q96II8 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
LRCH3Q96II8 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms