Protein–RNA interactions for Protein: Q96FS4

SIPA1, Signal-induced proliferation-associated protein 1, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1Q96FS4 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
SIPA1Q96FS4 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC15.83■□□□□ 0.13
SIPA1Q96FS4 AL607033.1-201ENST00000623900 1599 ntBASIC15.83■□□□□ 0.13
SIPA1Q96FS4 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
SIPA1Q96FS4 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
SIPA1Q96FS4 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.13
SIPA1Q96FS4 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC15.83■□□□□ 0.13
SIPA1Q96FS4 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
SIPA1Q96FS4 AL162727.3-201ENST00000635661 2787 ntBASIC15.83■□□□□ 0.13
SIPA1Q96FS4 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC15.83■□□□□ 0.13
SIPA1Q96FS4 AC079328.2-201ENST00000561241 3354 ntBASIC15.83■□□□□ 0.13
SIPA1Q96FS4 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
SIPA1Q96FS4 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
SIPA1Q96FS4 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
SIPA1Q96FS4 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SIPA1Q96FS4 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
SIPA1Q96FS4 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
SIPA1Q96FS4 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC15.83■□□□□ 0.12
SIPA1Q96FS4 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SIPA1Q96FS4 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC15.83■□□□□ 0.12
SIPA1Q96FS4 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
SIPA1Q96FS4 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SIPA1Q96FS4 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
SIPA1Q96FS4 ANKRD19P-201ENST00000338192 862 ntBASIC15.83■□□□□ 0.12
SIPA1Q96FS4 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
SIPA1Q96FS4 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC15.83■□□□□ 0.12
SIPA1Q96FS4 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
SIPA1Q96FS4 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC15.83■□□□□ 0.12
SIPA1Q96FS4 KLF2P4-201ENST00000451959 1225 ntBASIC15.83■□□□□ 0.12
SIPA1Q96FS4 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SIPA1Q96FS4 AC120045.2-201ENST00000567334 178 ntBASIC15.83■□□□□ 0.12
SIPA1Q96FS4 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC15.83■□□□□ 0.12
SIPA1Q96FS4 AC097359.3-201ENST00000603982 1210 ntBASIC15.83■□□□□ 0.12
SIPA1Q96FS4 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
SIPA1Q96FS4 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
SIPA1Q96FS4 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
SIPA1Q96FS4 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC15.83■□□□□ 0.12
SIPA1Q96FS4 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SIPA1Q96FS4 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SIPA1Q96FS4 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SIPA1Q96FS4 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC15.83■□□□□ 0.12
SIPA1Q96FS4 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
SIPA1Q96FS4 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC15.83■□□□□ 0.12
SIPA1Q96FS4 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
SIPA1Q96FS4 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
SIPA1Q96FS4 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SIPA1Q96FS4 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
SIPA1Q96FS4 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
SIPA1Q96FS4 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC15.82■□□□□ 0.12
SIPA1Q96FS4 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
SIPA1Q96FS4 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
SIPA1Q96FS4 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SIPA1Q96FS4 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SIPA1Q96FS4 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
SIPA1Q96FS4 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
SIPA1Q96FS4 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SIPA1Q96FS4 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SIPA1Q96FS4 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SIPA1Q96FS4 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SIPA1Q96FS4 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SIPA1Q96FS4 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SIPA1Q96FS4 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SIPA1Q96FS4 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SIPA1Q96FS4 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SIPA1Q96FS4 MIR648-201ENST00000385046 94 ntBASIC15.82■□□□□ 0.12
SIPA1Q96FS4 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SIPA1Q96FS4 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
SIPA1Q96FS4 BCRP2-202ENST00000447763 634 ntBASIC15.82■□□□□ 0.12
SIPA1Q96FS4 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC15.82■□□□□ 0.12
SIPA1Q96FS4 CTBP2P5-201ENST00000454986 1264 ntBASIC15.82■□□□□ 0.12
SIPA1Q96FS4 BCRP6-201ENST00000510112 632 ntBASIC15.82■□□□□ 0.12
SIPA1Q96FS4 BCRP7-201ENST00000511549 544 ntBASIC15.82■□□□□ 0.12
SIPA1Q96FS4 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC15.82■□□□□ 0.12
SIPA1Q96FS4 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
SIPA1Q96FS4 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC15.82■□□□□ 0.12
SIPA1Q96FS4 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC15.82■□□□□ 0.12
SIPA1Q96FS4 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC15.82■□□□□ 0.12
SIPA1Q96FS4 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC15.82■□□□□ 0.12
SIPA1Q96FS4 WNT11-204ENST00000621122 789 ntTSL 5 BASIC15.82■□□□□ 0.12
SIPA1Q96FS4 AL033527.4-201ENST00000641026 673 ntBASIC15.82■□□□□ 0.12
SIPA1Q96FS4 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
SIPA1Q96FS4 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SIPA1Q96FS4 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
SIPA1Q96FS4 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SIPA1Q96FS4 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
SIPA1Q96FS4 PDIA3P1-201ENST00000471856 1510 ntBASIC15.82■□□□□ 0.12
SIPA1Q96FS4 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SIPA1Q96FS4 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC15.82■□□□□ 0.12
SIPA1Q96FS4 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SIPA1Q96FS4 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
SIPA1Q96FS4 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC15.82■□□□□ 0.12
SIPA1Q96FS4 OS9-205ENST00000413095 1660 ntTSL 2 BASIC15.82■□□□□ 0.12
SIPA1Q96FS4 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC15.82■□□□□ 0.12
SIPA1Q96FS4 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC15.82■□□□□ 0.12
SIPA1Q96FS4 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SIPA1Q96FS4 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SIPA1Q96FS4 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SIPA1Q96FS4 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC15.82■□□□□ 0.12
SIPA1Q96FS4 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SIPA1Q96FS4 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms