Protein–RNA interactions for Protein: Q8WVM7

STAG1, Cohesin subunit SA-1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
STAG1Q8WVM7 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC18.54■□□□□ 0.56
STAG1Q8WVM7 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
STAG1Q8WVM7 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC18.54■□□□□ 0.56
STAG1Q8WVM7 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC18.54■□□□□ 0.56
STAG1Q8WVM7 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC18.54■□□□□ 0.56
STAG1Q8WVM7 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC18.54■□□□□ 0.56
STAG1Q8WVM7 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC18.54■□□□□ 0.56
STAG1Q8WVM7 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC18.54■□□□□ 0.56
STAG1Q8WVM7 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC18.54■□□□□ 0.56
STAG1Q8WVM7 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
STAG1Q8WVM7 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
STAG1Q8WVM7 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
STAG1Q8WVM7 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
STAG1Q8WVM7 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
STAG1Q8WVM7 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
STAG1Q8WVM7 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
STAG1Q8WVM7 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
STAG1Q8WVM7 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
STAG1Q8WVM7 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
STAG1Q8WVM7 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
STAG1Q8WVM7 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
STAG1Q8WVM7 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC18.54■□□□□ 0.56
STAG1Q8WVM7 AC092850.2-201ENST00000623821 2697 ntBASIC18.54■□□□□ 0.56
STAG1Q8WVM7 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
STAG1Q8WVM7 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
STAG1Q8WVM7 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
STAG1Q8WVM7 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
STAG1Q8WVM7 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
STAG1Q8WVM7 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
STAG1Q8WVM7 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC18.53■□□□□ 0.56
STAG1Q8WVM7 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
STAG1Q8WVM7 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
STAG1Q8WVM7 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC18.53■□□□□ 0.56
STAG1Q8WVM7 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
STAG1Q8WVM7 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
STAG1Q8WVM7 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
STAG1Q8WVM7 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
STAG1Q8WVM7 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC18.53■□□□□ 0.56
STAG1Q8WVM7 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC18.53■□□□□ 0.56
STAG1Q8WVM7 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
STAG1Q8WVM7 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC18.53■□□□□ 0.56
STAG1Q8WVM7 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC18.53■□□□□ 0.56
STAG1Q8WVM7 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC18.53■□□□□ 0.56
STAG1Q8WVM7 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
STAG1Q8WVM7 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
STAG1Q8WVM7 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
STAG1Q8WVM7 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
STAG1Q8WVM7 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
STAG1Q8WVM7 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
STAG1Q8WVM7 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC18.53■□□□□ 0.56
STAG1Q8WVM7 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
STAG1Q8WVM7 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC18.53■□□□□ 0.56
STAG1Q8WVM7 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
STAG1Q8WVM7 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
STAG1Q8WVM7 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
STAG1Q8WVM7 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC18.53■□□□□ 0.56
STAG1Q8WVM7 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
STAG1Q8WVM7 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
STAG1Q8WVM7 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
STAG1Q8WVM7 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
STAG1Q8WVM7 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
STAG1Q8WVM7 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
STAG1Q8WVM7 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.56
STAG1Q8WVM7 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
STAG1Q8WVM7 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
STAG1Q8WVM7 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
STAG1Q8WVM7 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.56
STAG1Q8WVM7 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
STAG1Q8WVM7 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
STAG1Q8WVM7 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC18.52■□□□□ 0.56
STAG1Q8WVM7 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC18.52■□□□□ 0.56
STAG1Q8WVM7 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC18.52■□□□□ 0.56
STAG1Q8WVM7 DGCR5-201ENST00000399539 862 ntBASIC18.52■□□□□ 0.56
STAG1Q8WVM7 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC18.52■□□□□ 0.56
STAG1Q8WVM7 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC18.52■□□□□ 0.56
STAG1Q8WVM7 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC18.52■□□□□ 0.56
STAG1Q8WVM7 RN7SL399P-201ENST00000471648 279 ntBASIC18.52■□□□□ 0.56
STAG1Q8WVM7 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
STAG1Q8WVM7 FADS2-205ENST00000517839 469 ntTSL 3 BASIC18.52■□□□□ 0.56
STAG1Q8WVM7 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC18.52■□□□□ 0.56
STAG1Q8WVM7 AC036164.1-201ENST00000570544 333 ntBASIC18.52■□□□□ 0.56
STAG1Q8WVM7 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC18.52■□□□□ 0.56
STAG1Q8WVM7 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
STAG1Q8WVM7 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC18.52■□□□□ 0.56
STAG1Q8WVM7 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC18.52■□□□□ 0.56
STAG1Q8WVM7 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC18.52■□□□□ 0.56
STAG1Q8WVM7 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
STAG1Q8WVM7 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
STAG1Q8WVM7 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
STAG1Q8WVM7 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
STAG1Q8WVM7 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC18.52■□□□□ 0.56
STAG1Q8WVM7 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.55
STAG1Q8WVM7 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
STAG1Q8WVM7 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC18.52■□□□□ 0.55
STAG1Q8WVM7 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
STAG1Q8WVM7 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC18.52■□□□□ 0.55
STAG1Q8WVM7 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
STAG1Q8WVM7 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
STAG1Q8WVM7 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
STAG1Q8WVM7 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC18.51■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 55.7 ms