Protein–RNA interactions for Protein: Q8TC90

CCER1, Coiled-coil domain-containing glutamate-rich protein 1, humanhuman

Predicted RBP Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCER1Q8TC90 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC23.66■■□□□ 1.38
CCER1Q8TC90 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC23.66■■□□□ 1.38
CCER1Q8TC90 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC23.66■■□□□ 1.38
CCER1Q8TC90 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC23.66■■□□□ 1.38
CCER1Q8TC90 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC23.66■■□□□ 1.38
CCER1Q8TC90 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC23.66■■□□□ 1.38
CCER1Q8TC90 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC23.66■■□□□ 1.38
CCER1Q8TC90 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC23.66■■□□□ 1.38
CCER1Q8TC90 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC23.66■■□□□ 1.38
CCER1Q8TC90 AC140113.2-201ENST00000604370 208 ntBASIC23.66■■□□□ 1.38
CCER1Q8TC90 AC008267.7-201ENST00000624570 1194 ntBASIC23.66■■□□□ 1.38
CCER1Q8TC90 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC23.66■■□□□ 1.38
CCER1Q8TC90 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC23.66■■□□□ 1.38
CCER1Q8TC90 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC23.66■■□□□ 1.38
CCER1Q8TC90 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
CCER1Q8TC90 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC23.66■■□□□ 1.38
CCER1Q8TC90 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC23.66■■□□□ 1.38
CCER1Q8TC90 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC23.66■■□□□ 1.38
CCER1Q8TC90 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
CCER1Q8TC90 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
CCER1Q8TC90 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
CCER1Q8TC90 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
CCER1Q8TC90 ZNF259P1-201ENST00000407656 1365 ntBASIC23.65■■□□□ 1.38
CCER1Q8TC90 AC126755.1-201ENST00000525846 6405 ntBASIC23.65■■□□□ 1.38
CCER1Q8TC90 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
CCER1Q8TC90 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC23.65■■□□□ 1.38
CCER1Q8TC90 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC23.65■■□□□ 1.38
CCER1Q8TC90 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
CCER1Q8TC90 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC23.65■■□□□ 1.38
CCER1Q8TC90 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC23.65■■□□□ 1.38
CCER1Q8TC90 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
CCER1Q8TC90 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
CCER1Q8TC90 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC23.65■■□□□ 1.38
CCER1Q8TC90 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC23.65■■□□□ 1.38
CCER1Q8TC90 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC23.65■■□□□ 1.38
CCER1Q8TC90 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC23.65■■□□□ 1.38
CCER1Q8TC90 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
CCER1Q8TC90 AC004987.2-201ENST00000395959 1148 ntBASIC23.65■■□□□ 1.38
CCER1Q8TC90 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC23.65■■□□□ 1.38
CCER1Q8TC90 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC23.65■■□□□ 1.38
CCER1Q8TC90 HNRNPA1P28-201ENST00000424481 961 ntBASIC23.65■■□□□ 1.38
CCER1Q8TC90 RPS8P6-201ENST00000426177 609 ntBASIC23.65■■□□□ 1.38
CCER1Q8TC90 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC23.65■■□□□ 1.38
CCER1Q8TC90 KRT18P3-201ENST00000451602 1288 ntBASIC23.65■■□□□ 1.38
CCER1Q8TC90 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC23.65■■□□□ 1.38
CCER1Q8TC90 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC23.65■■□□□ 1.38
CCER1Q8TC90 INO80E-210ENST00000567705 880 ntTSL 3 BASIC23.65■■□□□ 1.38
CCER1Q8TC90 COQ9-214ENST00000567933 882 ntTSL 3 BASIC23.65■■□□□ 1.38
CCER1Q8TC90 IGHV3OR16-6-201ENST00000568775 360 ntBASIC23.65■■□□□ 1.38
CCER1Q8TC90 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
CCER1Q8TC90 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC23.65■■□□□ 1.38
CCER1Q8TC90 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
CCER1Q8TC90 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
CCER1Q8TC90 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC23.65■■□□□ 1.38
CCER1Q8TC90 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
CCER1Q8TC90 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
CCER1Q8TC90 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC23.65■■□□□ 1.38
CCER1Q8TC90 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
CCER1Q8TC90 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC23.65■■□□□ 1.38
CCER1Q8TC90 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC23.65■■□□□ 1.38
CCER1Q8TC90 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC23.65■■□□□ 1.38
CCER1Q8TC90 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
CCER1Q8TC90 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC23.64■■□□□ 1.38
CCER1Q8TC90 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC23.64■■□□□ 1.38
CCER1Q8TC90 PARN-202ENST00000420015 2360 ntTSL 2 BASIC23.64■■□□□ 1.38
CCER1Q8TC90 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC23.64■■□□□ 1.38
CCER1Q8TC90 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC23.64■■□□□ 1.38
CCER1Q8TC90 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC23.64■■□□□ 1.38
CCER1Q8TC90 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
CCER1Q8TC90 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
CCER1Q8TC90 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
CCER1Q8TC90 RAC2-202ENST00000401529 569 ntTSL 4 BASIC23.64■■□□□ 1.37
CCER1Q8TC90 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
CCER1Q8TC90 MED15P5-201ENST00000423150 992 ntBASIC23.64■■□□□ 1.37
CCER1Q8TC90 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC23.64■■□□□ 1.37
CCER1Q8TC90 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC23.64■■□□□ 1.37
CCER1Q8TC90 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC23.64■■□□□ 1.37
CCER1Q8TC90 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.37
CCER1Q8TC90 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC23.64■■□□□ 1.37
CCER1Q8TC90 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC23.64■■□□□ 1.37
CCER1Q8TC90 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC23.64■■□□□ 1.37
CCER1Q8TC90 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC23.64■■□□□ 1.37
CCER1Q8TC90 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC23.64■■□□□ 1.37
CCER1Q8TC90 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
CCER1Q8TC90 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.37
CCER1Q8TC90 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
CCER1Q8TC90 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC23.64■■□□□ 1.37
CCER1Q8TC90 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
CCER1Q8TC90 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC23.64■■□□□ 1.37
CCER1Q8TC90 STK33-217ENST00000534493 1895 ntTSL 2 BASIC23.64■■□□□ 1.37
CCER1Q8TC90 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
CCER1Q8TC90 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC23.63■■□□□ 1.37
CCER1Q8TC90 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC23.63■■□□□ 1.37
CCER1Q8TC90 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
CCER1Q8TC90 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
CCER1Q8TC90 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC23.63■■□□□ 1.37
CCER1Q8TC90 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
CCER1Q8TC90 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC23.63■■□□□ 1.37
CCER1Q8TC90 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC23.63■■□□□ 1.37
CCER1Q8TC90 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms