Protein–RNA interactions for Protein: Q8NHG7

SVIP, Small VCP/p97-interacting protein, humanhuman

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SVIPQ8NHG7 DTX2P1-UPK3BP1-PMS2P11-203ENST00000636308 4646 ntTSL 5 BASIC9.65□□□□□ -0.87
SVIPQ8NHG7 SYS1-201ENST00000243918 2862 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
SVIPQ8NHG7 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC9.65□□□□□ -0.87
SVIPQ8NHG7 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC9.65□□□□□ -0.87
SVIPQ8NHG7 AC022336.3-201ENST00000624807 1986 ntBASIC9.64□□□□□ -0.87
SVIPQ8NHG7 SH3YL1-229ENST00000626873 1973 ntTSL 5 BASIC9.64□□□□□ -0.87
SVIPQ8NHG7 RASGRP4-205ENST00000586305 3061 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
SVIPQ8NHG7 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC9.64□□□□□ -0.87
SVIPQ8NHG7 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
SVIPQ8NHG7 LINC01254-202ENST00000567609 1907 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
SVIPQ8NHG7 PCDHGA7-202ENST00000617050 3262 ntAPPRIS P1 BASIC9.64□□□□□ -0.87
SVIPQ8NHG7 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC9.64□□□□□ -0.87
SVIPQ8NHG7 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC9.64□□□□□ -0.87
SVIPQ8NHG7 LRTM2-202ENST00000535041 3236 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
SVIPQ8NHG7 ARF1-201ENST00000272102 1888 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
SVIPQ8NHG7 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC9.64□□□□□ -0.87
SVIPQ8NHG7 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
SVIPQ8NHG7 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
SVIPQ8NHG7 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
SVIPQ8NHG7 AC020658.6-201ENST00000623564 1870 ntBASIC9.64□□□□□ -0.87
SVIPQ8NHG7 VGLL4-201ENST00000273038 3725 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
SVIPQ8NHG7 ATAT1-203ENST00000329992 2119 ntAPPRIS P3 TSL 1 (best) BASIC9.64□□□□□ -0.87
SVIPQ8NHG7 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
SVIPQ8NHG7 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC9.64□□□□□ -0.87
SVIPQ8NHG7 VDR-208ENST00000550325 3925 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
SVIPQ8NHG7 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
SVIPQ8NHG7 ARHGAP24-203ENST00000395184 4661 ntAPPRIS P1 TSL 2 BASIC9.64□□□□□ -0.87
SVIPQ8NHG7 IL7-201ENST00000263851 2076 ntAPPRIS P3 TSL 1 (best) BASIC9.64□□□□□ -0.87
SVIPQ8NHG7 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC9.64□□□□□ -0.87
SVIPQ8NHG7 MIR194-2HG-201ENST00000413053 3647 ntTSL 2 BASIC9.64□□□□□ -0.87
SVIPQ8NHG7 AC093525.7-201ENST00000569852 3626 ntBASIC9.64□□□□□ -0.87
SVIPQ8NHG7 KLF11-206ENST00000540845 3885 ntAPPRIS ALT2 TSL 2 BASIC9.64□□□□□ -0.87
SVIPQ8NHG7 C3orf49-201ENST00000295896 1292 ntAPPRIS P5 TSL 2 BASIC9.64□□□□□ -0.87
SVIPQ8NHG7 SERF2-217ENST00000630046 862 ntTSL 5 BASIC9.64□□□□□ -0.87
SVIPQ8NHG7 PCBP2-OT1-201ENST00000634357 590 ntBASIC9.64□□□□□ -0.87
SVIPQ8NHG7 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC9.64□□□□□ -0.87
SVIPQ8NHG7 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC9.64□□□□□ -0.87
SVIPQ8NHG7 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC9.64□□□□□ -0.87
SVIPQ8NHG7 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
SVIPQ8NHG7 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC9.64□□□□□ -0.87
SVIPQ8NHG7 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
SVIPQ8NHG7 CRX-202ENST00000539067 2275 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
SVIPQ8NHG7 TTI2-206ENST00000613904 2516 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
SVIPQ8NHG7 IL22RA1-201ENST00000270800 2798 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
SVIPQ8NHG7 APOBR-202ENST00000564831 3792 ntAPPRIS P2 TSL 1 (best) BASIC9.64□□□□□ -0.87
SVIPQ8NHG7 CPPED1-202ENST00000381774 6273 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
SVIPQ8NHG7 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC9.64□□□□□ -0.87
SVIPQ8NHG7 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC9.64□□□□□ -0.87
SVIPQ8NHG7 CACNB1-212ENST00000622445 3722 ntTSL 5 BASIC9.64□□□□□ -0.87
SVIPQ8NHG7 C14orf159-234ENST00000525393 2471 ntTSL 5 BASIC9.64□□□□□ -0.87
SVIPQ8NHG7 AC080112.4-201ENST00000623156 2491 ntBASIC9.64□□□□□ -0.87
SVIPQ8NHG7 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
SVIPQ8NHG7 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
SVIPQ8NHG7 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC9.64□□□□□ -0.87
SVIPQ8NHG7 RPL27A-201ENST00000314138 4916 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
SVIPQ8NHG7 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC9.64□□□□□ -0.87
SVIPQ8NHG7 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
SVIPQ8NHG7 TMEM57-201ENST00000374343 3917 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
SVIPQ8NHG7 RBM44-202ENST00000409864 3449 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
SVIPQ8NHG7 RASGRP4-215ENST00000614135 2942 ntTSL 5 BASIC9.64□□□□□ -0.87
SVIPQ8NHG7 AL592490.1-201ENST00000409186 6347 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
SVIPQ8NHG7 LINC00242-201ENST00000437615 2418 ntTSL 2 BASIC9.64□□□□□ -0.87
SVIPQ8NHG7 NIN-206ENST00000453196 6785 ntAPPRIS ALT2 TSL 5 BASIC9.64□□□□□ -0.87
SVIPQ8NHG7 ZNF793-209ENST00000589319 1915 ntTSL 5 BASIC9.64□□□□□ -0.87
SVIPQ8NHG7 ZBTB42-201ENST00000342537 3800 ntAPPRIS P1 BASIC9.64□□□□□ -0.87
SVIPQ8NHG7 MYO7B-201ENST00000409090 3567 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
SVIPQ8NHG7 IQSEC1-204ENST00000613206 3582 ntTSL 2 BASIC9.64□□□□□ -0.87
SVIPQ8NHG7 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC9.64□□□□□ -0.87
SVIPQ8NHG7 UGT1A4-201ENST00000373409 2388 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
SVIPQ8NHG7 SNHG14-212ENST00000549804 7844 ntTSL 5 BASIC9.64□□□□□ -0.87
SVIPQ8NHG7 RTL10-201ENST00000328554 6619 ntAPPRIS P2 TSL 1 (best) BASIC9.64□□□□□ -0.87
SVIPQ8NHG7 TRIT1-201ENST00000316891 2112 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
SVIPQ8NHG7 CHAT-202ENST00000339797 2124 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
SVIPQ8NHG7 MORC2-201ENST00000215862 4469 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
SVIPQ8NHG7 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
SVIPQ8NHG7 KDM5B-203ENST00000367265 10345 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
SVIPQ8NHG7 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
SVIPQ8NHG7 RUBCNL-208ENST00000429979 3979 ntAPPRIS P3 TSL 5 BASIC9.64□□□□□ -0.87
SVIPQ8NHG7 ARAP1-204ENST00000393609 5145 ntAPPRIS ALT2 TSL 2 BASIC9.64□□□□□ -0.87
SVIPQ8NHG7 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC9.64□□□□□ -0.87
SVIPQ8NHG7 KDM2A-210ENST00000529006 6967 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
SVIPQ8NHG7 AL157832.2-205ENST00000597245 1649 ntBASIC9.64□□□□□ -0.87
SVIPQ8NHG7 TOR1AIP1-212ENST00000606911 8704 ntAPPRIS P3 TSL 1 (best) BASIC9.63□□□□□ -0.87
SVIPQ8NHG7 EDRF1-202ENST00000356792 4128 ntAPPRIS ALT1 TSL 1 (best) BASIC9.63□□□□□ -0.87
SVIPQ8NHG7 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
SVIPQ8NHG7 NLRP2-206ENST00000427260 3411 ntTSL 2 BASIC9.63□□□□□ -0.87
SVIPQ8NHG7 PGLYRP4-201ENST00000359650 1834 ntAPPRIS P2 TSL 1 (best) BASIC9.63□□□□□ -0.87
SVIPQ8NHG7 STARD13-202ENST00000336934 5917 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
SVIPQ8NHG7 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
SVIPQ8NHG7 GRM4-201ENST00000374177 3590 ntTSL 2 BASIC9.63□□□□□ -0.87
SVIPQ8NHG7 WDFY2-203ENST00000612477 6932 ntTSL 2 BASIC9.63□□□□□ -0.87
SVIPQ8NHG7 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC9.63□□□□□ -0.87
SVIPQ8NHG7 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC9.63□□□□□ -0.87
SVIPQ8NHG7 KIR3DX1-205ENST00000610811 3325 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
SVIPQ8NHG7 AC139099.4-201ENST00000625083 3504 ntBASIC9.63□□□□□ -0.87
SVIPQ8NHG7 MALL-201ENST00000272462 3061 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
SVIPQ8NHG7 RAB6A-202ENST00000336083 3085 ntAPPRIS ALT1 TSL 1 (best) BASIC9.63□□□□□ -0.87
SVIPQ8NHG7 ADGRG1-255ENST00000567835 3741 ntAPPRIS P4 TSL 1 (best) BASIC9.63□□□□□ -0.87
SVIPQ8NHG7 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC9.63□□□□□ -0.87
SVIPQ8NHG7 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms