Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
SIMC1Q8NDZ2 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC14.96□□□□□ -0.01
SIMC1Q8NDZ2 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC14.96□□□□□ -0.01
SIMC1Q8NDZ2 AL353705.2-201ENST00000428243 662 ntBASIC14.96□□□□□ -0.01
SIMC1Q8NDZ2 AC244107.1-201ENST00000442033 332 ntBASIC14.96□□□□□ -0.01
SIMC1Q8NDZ2 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC14.96□□□□□ -0.01
SIMC1Q8NDZ2 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SIMC1Q8NDZ2 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC14.96□□□□□ -0.01
SIMC1Q8NDZ2 AL139010.1-201ENST00000454878 894 ntBASIC14.96□□□□□ -0.01
SIMC1Q8NDZ2 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SIMC1Q8NDZ2 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
SIMC1Q8NDZ2 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC14.96□□□□□ -0.01
SIMC1Q8NDZ2 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC14.96□□□□□ -0.01
SIMC1Q8NDZ2 RFPL4AP1-201ENST00000530883 850 ntBASIC14.96□□□□□ -0.01
SIMC1Q8NDZ2 AC004449.1-201ENST00000564240 433 ntBASIC14.96□□□□□ -0.01
SIMC1Q8NDZ2 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SIMC1Q8NDZ2 RN7SL828P-201ENST00000607615 303 ntBASIC14.96□□□□□ -0.01
SIMC1Q8NDZ2 AC007967.4-201ENST00000614700 386 ntBASIC14.96□□□□□ -0.01
SIMC1Q8NDZ2 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC14.96□□□□□ -0.01
SIMC1Q8NDZ2 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SIMC1Q8NDZ2 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
SIMC1Q8NDZ2 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
SIMC1Q8NDZ2 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
SIMC1Q8NDZ2 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
SIMC1Q8NDZ2 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
SIMC1Q8NDZ2 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.02
SIMC1Q8NDZ2 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC14.96□□□□□ -0.02
SIMC1Q8NDZ2 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
SIMC1Q8NDZ2 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.02
SIMC1Q8NDZ2 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SIMC1Q8NDZ2 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC14.95□□□□□ -0.02
SIMC1Q8NDZ2 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SIMC1Q8NDZ2 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SIMC1Q8NDZ2 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC14.95□□□□□ -0.02
SIMC1Q8NDZ2 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC14.95□□□□□ -0.02
SIMC1Q8NDZ2 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SIMC1Q8NDZ2 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC14.95□□□□□ -0.02
SIMC1Q8NDZ2 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SIMC1Q8NDZ2 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SIMC1Q8NDZ2 REXO1L1P-202ENST00000608646 1974 ntBASIC14.95□□□□□ -0.02
SIMC1Q8NDZ2 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC14.95□□□□□ -0.02
SIMC1Q8NDZ2 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
SIMC1Q8NDZ2 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SIMC1Q8NDZ2 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
SIMC1Q8NDZ2 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
SIMC1Q8NDZ2 RBM39-205ENST00000397370 612 ntTSL 2 BASIC14.95□□□□□ -0.02
SIMC1Q8NDZ2 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SIMC1Q8NDZ2 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC14.95□□□□□ -0.02
SIMC1Q8NDZ2 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC14.95□□□□□ -0.02
SIMC1Q8NDZ2 PON3-203ENST00000427422 894 ntTSL 3 BASIC14.95□□□□□ -0.02
SIMC1Q8NDZ2 MTND6P24-201ENST00000440466 518 ntBASIC14.95□□□□□ -0.02
SIMC1Q8NDZ2 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC14.95□□□□□ -0.02
SIMC1Q8NDZ2 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC14.95□□□□□ -0.02
SIMC1Q8NDZ2 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC14.95□□□□□ -0.02
SIMC1Q8NDZ2 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SIMC1Q8NDZ2 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC14.95□□□□□ -0.02
SIMC1Q8NDZ2 AC243562.2-201ENST00000561247 970 ntBASIC14.95□□□□□ -0.02
SIMC1Q8NDZ2 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC14.95□□□□□ -0.02
SIMC1Q8NDZ2 LITAF-210ENST00000571976 548 ntTSL 2 BASIC14.95□□□□□ -0.02
SIMC1Q8NDZ2 LITAF-214ENST00000574703 486 ntTSL 2 BASIC14.95□□□□□ -0.02
SIMC1Q8NDZ2 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC14.95□□□□□ -0.02
SIMC1Q8NDZ2 AC011477.6-201ENST00000604980 1927 ntBASIC14.95□□□□□ -0.02
SIMC1Q8NDZ2 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SIMC1Q8NDZ2 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
SIMC1Q8NDZ2 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
SIMC1Q8NDZ2 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
SIMC1Q8NDZ2 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC14.95□□□□□ -0.02
SIMC1Q8NDZ2 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
SIMC1Q8NDZ2 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
SIMC1Q8NDZ2 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SIMC1Q8NDZ2 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC14.95□□□□□ -0.02
SIMC1Q8NDZ2 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
SIMC1Q8NDZ2 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SIMC1Q8NDZ2 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
SIMC1Q8NDZ2 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
SIMC1Q8NDZ2 AC022532.1-201ENST00000624563 1728 ntBASIC14.95□□□□□ -0.02
SIMC1Q8NDZ2 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC14.95□□□□□ -0.02
SIMC1Q8NDZ2 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
SIMC1Q8NDZ2 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SIMC1Q8NDZ2 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC14.94□□□□□ -0.02
SIMC1Q8NDZ2 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC14.94□□□□□ -0.02
SIMC1Q8NDZ2 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
SIMC1Q8NDZ2 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
SIMC1Q8NDZ2 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SIMC1Q8NDZ2 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SIMC1Q8NDZ2 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC14.94□□□□□ -0.02
SIMC1Q8NDZ2 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SIMC1Q8NDZ2 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC14.94□□□□□ -0.02
SIMC1Q8NDZ2 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
SIMC1Q8NDZ2 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
SIMC1Q8NDZ2 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
SIMC1Q8NDZ2 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
SIMC1Q8NDZ2 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
SIMC1Q8NDZ2 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SIMC1Q8NDZ2 SATB1-217ENST00000493952 626 ntTSL 3 BASIC14.94□□□□□ -0.02
SIMC1Q8NDZ2 EHF-205ENST00000527935 557 ntTSL 2 BASIC14.94□□□□□ -0.02
SIMC1Q8NDZ2 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC14.94□□□□□ -0.02
SIMC1Q8NDZ2 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC14.94□□□□□ -0.02
SIMC1Q8NDZ2 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC14.94□□□□□ -0.02
SIMC1Q8NDZ2 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC14.94□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 82.6 ms