Protein–RNA interactions for Protein: Q8N8F7

LSMEM1, Leucine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1Q8N8F7 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
LSMEM1Q8N8F7 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
LSMEM1Q8N8F7 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC14.54□□□□□ -0.08
LSMEM1Q8N8F7 SLC9A7P1-201ENST00000554295 3311 ntBASIC14.54□□□□□ -0.08
LSMEM1Q8N8F7 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LSMEM1Q8N8F7 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LSMEM1Q8N8F7 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
LSMEM1Q8N8F7 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
LSMEM1Q8N8F7 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LSMEM1Q8N8F7 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
LSMEM1Q8N8F7 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LSMEM1Q8N8F7 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
LSMEM1Q8N8F7 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC14.53□□□□□ -0.08
LSMEM1Q8N8F7 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LSMEM1Q8N8F7 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LSMEM1Q8N8F7 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LSMEM1Q8N8F7 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LSMEM1Q8N8F7 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
LSMEM1Q8N8F7 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
LSMEM1Q8N8F7 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LSMEM1Q8N8F7 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC14.53□□□□□ -0.08
LSMEM1Q8N8F7 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
LSMEM1Q8N8F7 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC14.53□□□□□ -0.08
LSMEM1Q8N8F7 KRT18P32-201ENST00000424695 1287 ntBASIC14.53□□□□□ -0.08
LSMEM1Q8N8F7 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC14.53□□□□□ -0.08
LSMEM1Q8N8F7 GATD1-206ENST00000526325 756 ntTSL 5 BASIC14.53□□□□□ -0.08
LSMEM1Q8N8F7 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC14.53□□□□□ -0.08
LSMEM1Q8N8F7 AC093520.2-201ENST00000561830 333 ntBASIC14.53□□□□□ -0.08
LSMEM1Q8N8F7 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC14.53□□□□□ -0.08
LSMEM1Q8N8F7 MIR3687-2-201ENST00000577708 61 ntBASIC14.53□□□□□ -0.08
LSMEM1Q8N8F7 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC14.53□□□□□ -0.08
LSMEM1Q8N8F7 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC14.53□□□□□ -0.08
LSMEM1Q8N8F7 AC018529.1-201ENST00000613063 361 ntBASIC14.53□□□□□ -0.08
LSMEM1Q8N8F7 MIR3687-1-201ENST00000614492 61 ntBASIC14.53□□□□□ -0.08
LSMEM1Q8N8F7 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LSMEM1Q8N8F7 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC14.53□□□□□ -0.08
LSMEM1Q8N8F7 AC092127.1-201ENST00000567093 3455 ntBASIC14.53□□□□□ -0.08
LSMEM1Q8N8F7 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LSMEM1Q8N8F7 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LSMEM1Q8N8F7 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LSMEM1Q8N8F7 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LSMEM1Q8N8F7 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LSMEM1Q8N8F7 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LSMEM1Q8N8F7 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC14.53□□□□□ -0.08
LSMEM1Q8N8F7 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC14.53□□□□□ -0.08
LSMEM1Q8N8F7 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC14.53□□□□□ -0.08
LSMEM1Q8N8F7 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
LSMEM1Q8N8F7 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC14.52□□□□□ -0.08
LSMEM1Q8N8F7 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
LSMEM1Q8N8F7 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
LSMEM1Q8N8F7 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
LSMEM1Q8N8F7 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC14.52□□□□□ -0.08
LSMEM1Q8N8F7 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
LSMEM1Q8N8F7 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
LSMEM1Q8N8F7 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC14.52□□□□□ -0.08
LSMEM1Q8N8F7 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
LSMEM1Q8N8F7 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC14.52□□□□□ -0.08
LSMEM1Q8N8F7 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
LSMEM1Q8N8F7 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
LSMEM1Q8N8F7 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
LSMEM1Q8N8F7 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
LSMEM1Q8N8F7 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
LSMEM1Q8N8F7 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC14.52□□□□□ -0.08
LSMEM1Q8N8F7 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
LSMEM1Q8N8F7 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
LSMEM1Q8N8F7 MORC4-202ENST00000355610 3834 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
LSMEM1Q8N8F7 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
LSMEM1Q8N8F7 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC14.52□□□□□ -0.09
LSMEM1Q8N8F7 FAM58DP-201ENST00000428076 619 ntBASIC14.52□□□□□ -0.09
LSMEM1Q8N8F7 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC14.52□□□□□ -0.09
LSMEM1Q8N8F7 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
LSMEM1Q8N8F7 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC14.52□□□□□ -0.09
LSMEM1Q8N8F7 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
LSMEM1Q8N8F7 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
LSMEM1Q8N8F7 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
LSMEM1Q8N8F7 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
LSMEM1Q8N8F7 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC14.52□□□□□ -0.09
LSMEM1Q8N8F7 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC14.52□□□□□ -0.09
LSMEM1Q8N8F7 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
LSMEM1Q8N8F7 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
LSMEM1Q8N8F7 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
LSMEM1Q8N8F7 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
LSMEM1Q8N8F7 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
LSMEM1Q8N8F7 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
LSMEM1Q8N8F7 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
LSMEM1Q8N8F7 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
LSMEM1Q8N8F7 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC14.52□□□□□ -0.09
LSMEM1Q8N8F7 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
LSMEM1Q8N8F7 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
LSMEM1Q8N8F7 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC14.52□□□□□ -0.09
LSMEM1Q8N8F7 AC006058.4-201ENST00000624016 1670 ntBASIC14.52□□□□□ -0.09
LSMEM1Q8N8F7 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
LSMEM1Q8N8F7 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
LSMEM1Q8N8F7 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC14.51□□□□□ -0.09
LSMEM1Q8N8F7 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC14.51□□□□□ -0.09
LSMEM1Q8N8F7 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC14.51□□□□□ -0.09
LSMEM1Q8N8F7 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
LSMEM1Q8N8F7 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
LSMEM1Q8N8F7 AC026748.1-201ENST00000624349 3251 ntBASIC14.51□□□□□ -0.09
LSMEM1Q8N8F7 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms