Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC12.55□□□□□ -0.4
TTC9CQ8N5M4 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC12.55□□□□□ -0.4
TTC9CQ8N5M4 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
TTC9CQ8N5M4 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TTC9CQ8N5M4 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC12.54□□□□□ -0.4
TTC9CQ8N5M4 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TTC9CQ8N5M4 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TTC9CQ8N5M4 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
TTC9CQ8N5M4 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TTC9CQ8N5M4 AC132872.4-202ENST00000622924 2756 ntBASIC12.54□□□□□ -0.4
TTC9CQ8N5M4 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC12.54□□□□□ -0.4
TTC9CQ8N5M4 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
TTC9CQ8N5M4 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
TTC9CQ8N5M4 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
TTC9CQ8N5M4 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
TTC9CQ8N5M4 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC12.54□□□□□ -0.4
TTC9CQ8N5M4 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TTC9CQ8N5M4 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TTC9CQ8N5M4 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
TTC9CQ8N5M4 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TTC9CQ8N5M4 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC12.54□□□□□ -0.4
TTC9CQ8N5M4 FO393414.2-201ENST00000405153 598 ntBASIC12.54□□□□□ -0.4
TTC9CQ8N5M4 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC12.54□□□□□ -0.4
TTC9CQ8N5M4 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC12.54□□□□□ -0.4
TTC9CQ8N5M4 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC12.54□□□□□ -0.4
TTC9CQ8N5M4 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TTC9CQ8N5M4 MIR4313-201ENST00000580760 101 ntBASIC12.54□□□□□ -0.4
TTC9CQ8N5M4 WDR88-203ENST00000592765 651 ntTSL 5 BASIC12.54□□□□□ -0.4
TTC9CQ8N5M4 AL596442.2-201ENST00000610240 980 ntBASIC12.54□□□□□ -0.4
TTC9CQ8N5M4 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TTC9CQ8N5M4 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TTC9CQ8N5M4 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
TTC9CQ8N5M4 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.4
TTC9CQ8N5M4 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TTC9CQ8N5M4 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
TTC9CQ8N5M4 WARS-232ENST00000556645 2508 ntTSL 5 BASIC12.54□□□□□ -0.4
TTC9CQ8N5M4 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
TTC9CQ8N5M4 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
TTC9CQ8N5M4 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TTC9CQ8N5M4 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TTC9CQ8N5M4 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
TTC9CQ8N5M4 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
TTC9CQ8N5M4 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TTC9CQ8N5M4 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
TTC9CQ8N5M4 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
TTC9CQ8N5M4 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC12.54□□□□□ -0.4
TTC9CQ8N5M4 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TTC9CQ8N5M4 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC12.53□□□□□ -0.4
TTC9CQ8N5M4 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC12.53□□□□□ -0.4
TTC9CQ8N5M4 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
TTC9CQ8N5M4 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
TTC9CQ8N5M4 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC12.53□□□□□ -0.4
TTC9CQ8N5M4 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TTC9CQ8N5M4 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
TTC9CQ8N5M4 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
TTC9CQ8N5M4 AC020658.6-201ENST00000623564 1870 ntBASIC12.53□□□□□ -0.4
TTC9CQ8N5M4 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC12.53□□□□□ -0.4
TTC9CQ8N5M4 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
TTC9CQ8N5M4 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TTC9CQ8N5M4 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
TTC9CQ8N5M4 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC12.53□□□□□ -0.4
TTC9CQ8N5M4 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC12.53□□□□□ -0.4
TTC9CQ8N5M4 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TTC9CQ8N5M4 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TTC9CQ8N5M4 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TTC9CQ8N5M4 MIR1233-2-201ENST00000408138 82 ntBASIC12.53□□□□□ -0.4
TTC9CQ8N5M4 MIR1233-1-201ENST00000408722 82 ntBASIC12.53□□□□□ -0.4
TTC9CQ8N5M4 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TTC9CQ8N5M4 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC12.53□□□□□ -0.4
TTC9CQ8N5M4 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
TTC9CQ8N5M4 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC12.53□□□□□ -0.4
TTC9CQ8N5M4 DNAJB3-202ENST00000449667 1266 ntBASIC12.53□□□□□ -0.4
TTC9CQ8N5M4 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC12.53□□□□□ -0.4
TTC9CQ8N5M4 HLA-J-203ENST00000494367 1087 ntBASIC12.53□□□□□ -0.4
TTC9CQ8N5M4 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
TTC9CQ8N5M4 DAD1-205ENST00000543337 501 ntTSL 3 BASIC12.53□□□□□ -0.4
TTC9CQ8N5M4 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC12.53□□□□□ -0.4
TTC9CQ8N5M4 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC12.53□□□□□ -0.4
TTC9CQ8N5M4 MIR4453-201ENST00000584019 89 ntBASIC12.53□□□□□ -0.4
TTC9CQ8N5M4 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC12.53□□□□□ -0.4
TTC9CQ8N5M4 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
TTC9CQ8N5M4 AL133215.2-201ENST00000609242 977 ntBASIC12.53□□□□□ -0.4
TTC9CQ8N5M4 MIR6080-201ENST00000617359 66 ntBASIC12.53□□□□□ -0.4
TTC9CQ8N5M4 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC12.53□□□□□ -0.4
TTC9CQ8N5M4 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TTC9CQ8N5M4 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
TTC9CQ8N5M4 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TTC9CQ8N5M4 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC12.53□□□□□ -0.4
TTC9CQ8N5M4 AC018892.3-201ENST00000623986 2499 ntBASIC12.53□□□□□ -0.4
TTC9CQ8N5M4 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC12.53□□□□□ -0.4
TTC9CQ8N5M4 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC12.53□□□□□ -0.4
TTC9CQ8N5M4 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TTC9CQ8N5M4 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TTC9CQ8N5M4 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TTC9CQ8N5M4 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC12.53□□□□□ -0.4
TTC9CQ8N5M4 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
TTC9CQ8N5M4 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC12.53□□□□□ -0.4
TTC9CQ8N5M4 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
TTC9CQ8N5M4 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
TTC9CQ8N5M4 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms