Protein–RNA interactions for Protein: Q8N4T4

ARHGEF39, Rho guanine nucleotide exchange factor 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39Q8N4T4 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
ARHGEF39Q8N4T4 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
ARHGEF39Q8N4T4 CICP13-201ENST00000422015 2789 ntBASIC14.83□□□□□ -0.04
ARHGEF39Q8N4T4 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
ARHGEF39Q8N4T4 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
ARHGEF39Q8N4T4 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
ARHGEF39Q8N4T4 AC092127.1-201ENST00000567093 3455 ntBASIC14.83□□□□□ -0.04
ARHGEF39Q8N4T4 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC14.83□□□□□ -0.04
ARHGEF39Q8N4T4 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
ARHGEF39Q8N4T4 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC14.83□□□□□ -0.04
ARHGEF39Q8N4T4 NSL1-201ENST00000366976 722 ntTSL 2 BASIC14.83□□□□□ -0.04
ARHGEF39Q8N4T4 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
ARHGEF39Q8N4T4 COX5BP8-201ENST00000416911 349 ntBASIC14.83□□□□□ -0.04
ARHGEF39Q8N4T4 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC14.83□□□□□ -0.04
ARHGEF39Q8N4T4 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC14.83□□□□□ -0.04
ARHGEF39Q8N4T4 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC14.83□□□□□ -0.04
ARHGEF39Q8N4T4 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC14.83□□□□□ -0.04
ARHGEF39Q8N4T4 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC14.83□□□□□ -0.04
ARHGEF39Q8N4T4 GAPDHP40-201ENST00000505218 1006 ntBASIC14.83□□□□□ -0.04
ARHGEF39Q8N4T4 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC14.83□□□□□ -0.04
ARHGEF39Q8N4T4 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC14.83□□□□□ -0.04
ARHGEF39Q8N4T4 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
ARHGEF39Q8N4T4 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC14.83□□□□□ -0.04
ARHGEF39Q8N4T4 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC14.83□□□□□ -0.04
ARHGEF39Q8N4T4 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
ARHGEF39Q8N4T4 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
ARHGEF39Q8N4T4 DKFZP434H168-201ENST00000567381 1905 ntBASIC14.83□□□□□ -0.04
ARHGEF39Q8N4T4 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC14.83□□□□□ -0.04
ARHGEF39Q8N4T4 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
ARHGEF39Q8N4T4 POLL-217ENST00000628479 1953 ntTSL 5 BASIC14.83□□□□□ -0.04
ARHGEF39Q8N4T4 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC14.83□□□□□ -0.04
ARHGEF39Q8N4T4 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
ARHGEF39Q8N4T4 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
ARHGEF39Q8N4T4 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
ARHGEF39Q8N4T4 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
ARHGEF39Q8N4T4 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
ARHGEF39Q8N4T4 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC14.83□□□□□ -0.04
ARHGEF39Q8N4T4 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
ARHGEF39Q8N4T4 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
ARHGEF39Q8N4T4 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
ARHGEF39Q8N4T4 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC14.82□□□□□ -0.04
ARHGEF39Q8N4T4 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ARHGEF39Q8N4T4 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC14.82□□□□□ -0.04
ARHGEF39Q8N4T4 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
ARHGEF39Q8N4T4 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC14.82□□□□□ -0.04
ARHGEF39Q8N4T4 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC14.82□□□□□ -0.04
ARHGEF39Q8N4T4 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
ARHGEF39Q8N4T4 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ARHGEF39Q8N4T4 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ARHGEF39Q8N4T4 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ARHGEF39Q8N4T4 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ARHGEF39Q8N4T4 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
ARHGEF39Q8N4T4 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC14.82□□□□□ -0.04
ARHGEF39Q8N4T4 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC14.82□□□□□ -0.04
ARHGEF39Q8N4T4 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ARHGEF39Q8N4T4 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ARHGEF39Q8N4T4 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ARHGEF39Q8N4T4 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
ARHGEF39Q8N4T4 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
ARHGEF39Q8N4T4 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC14.82□□□□□ -0.04
ARHGEF39Q8N4T4 GRAP-202ENST00000395635 834 ntTSL 2 BASIC14.82□□□□□ -0.04
ARHGEF39Q8N4T4 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC14.82□□□□□ -0.04
ARHGEF39Q8N4T4 AL442647.2-201ENST00000429864 857 ntBASIC14.82□□□□□ -0.04
ARHGEF39Q8N4T4 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ARHGEF39Q8N4T4 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC14.82□□□□□ -0.04
ARHGEF39Q8N4T4 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
ARHGEF39Q8N4T4 RN7SL692P-201ENST00000464677 288 ntBASIC14.82□□□□□ -0.04
ARHGEF39Q8N4T4 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC14.82□□□□□ -0.04
ARHGEF39Q8N4T4 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC14.82□□□□□ -0.04
ARHGEF39Q8N4T4 UBL5-208ENST00000593087 320 ntTSL 3 BASIC14.82□□□□□ -0.04
ARHGEF39Q8N4T4 AC027307.3-201ENST00000594262 1100 ntBASIC14.82□□□□□ -0.04
ARHGEF39Q8N4T4 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
ARHGEF39Q8N4T4 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
ARHGEF39Q8N4T4 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC14.82□□□□□ -0.04
ARHGEF39Q8N4T4 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC14.82□□□□□ -0.04
ARHGEF39Q8N4T4 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
ARHGEF39Q8N4T4 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ARHGEF39Q8N4T4 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC14.82□□□□□ -0.04
ARHGEF39Q8N4T4 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
ARHGEF39Q8N4T4 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ARHGEF39Q8N4T4 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ARHGEF39Q8N4T4 FER1L4-210ENST00000615531 5998 ntBASIC14.82□□□□□ -0.04
ARHGEF39Q8N4T4 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
ARHGEF39Q8N4T4 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
ARHGEF39Q8N4T4 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC14.82□□□□□ -0.04
ARHGEF39Q8N4T4 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
ARHGEF39Q8N4T4 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
ARHGEF39Q8N4T4 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
ARHGEF39Q8N4T4 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ARHGEF39Q8N4T4 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
ARHGEF39Q8N4T4 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC14.81□□□□□ -0.04
ARHGEF39Q8N4T4 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
ARHGEF39Q8N4T4 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
ARHGEF39Q8N4T4 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC14.81□□□□□ -0.04
ARHGEF39Q8N4T4 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC14.81□□□□□ -0.04
ARHGEF39Q8N4T4 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
ARHGEF39Q8N4T4 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC14.81□□□□□ -0.04
ARHGEF39Q8N4T4 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
ARHGEF39Q8N4T4 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
ARHGEF39Q8N4T4 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms