Protein–RNA interactions for Protein: Q8IUF1

CBWD2, COBW domain-containing protein 2, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD2Q8IUF1 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CBWD2Q8IUF1 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CBWD2Q8IUF1 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CBWD2Q8IUF1 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC17.14■□□□□ 0.33
CBWD2Q8IUF1 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CBWD2Q8IUF1 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
CBWD2Q8IUF1 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC17.13■□□□□ 0.33
CBWD2Q8IUF1 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CBWD2Q8IUF1 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CBWD2Q8IUF1 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CBWD2Q8IUF1 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CBWD2Q8IUF1 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
CBWD2Q8IUF1 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
CBWD2Q8IUF1 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC17.13■□□□□ 0.33
CBWD2Q8IUF1 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
CBWD2Q8IUF1 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CBWD2Q8IUF1 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC17.13■□□□□ 0.33
CBWD2Q8IUF1 CASK-202ENST00000378158 3848 ntTSL 5 BASIC17.13■□□□□ 0.33
CBWD2Q8IUF1 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
CBWD2Q8IUF1 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC17.13■□□□□ 0.33
CBWD2Q8IUF1 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CBWD2Q8IUF1 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC17.13■□□□□ 0.33
CBWD2Q8IUF1 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC17.13■□□□□ 0.33
CBWD2Q8IUF1 ARL16-202ENST00000570561 768 ntTSL 2 BASIC17.13■□□□□ 0.33
CBWD2Q8IUF1 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC17.13■□□□□ 0.33
CBWD2Q8IUF1 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CBWD2Q8IUF1 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC17.13■□□□□ 0.33
CBWD2Q8IUF1 AL096865.1-201ENST00000606796 927 ntBASIC17.13■□□□□ 0.33
CBWD2Q8IUF1 AJ011932.1-201ENST00000621707 465 ntBASIC17.13■□□□□ 0.33
CBWD2Q8IUF1 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC17.13■□□□□ 0.33
CBWD2Q8IUF1 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC17.13■□□□□ 0.33
CBWD2Q8IUF1 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CBWD2Q8IUF1 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CBWD2Q8IUF1 ING5-213ENST00000636051 4199 ntTSL 5 BASIC17.13■□□□□ 0.33
CBWD2Q8IUF1 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CBWD2Q8IUF1 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CBWD2Q8IUF1 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC17.13■□□□□ 0.33
CBWD2Q8IUF1 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC17.13■□□□□ 0.33
CBWD2Q8IUF1 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CBWD2Q8IUF1 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CBWD2Q8IUF1 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CBWD2Q8IUF1 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
CBWD2Q8IUF1 DEK-201ENST00000244776 1441 ntTSL 2 BASIC17.13■□□□□ 0.33
CBWD2Q8IUF1 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CBWD2Q8IUF1 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CBWD2Q8IUF1 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CBWD2Q8IUF1 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CBWD2Q8IUF1 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CBWD2Q8IUF1 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC17.12■□□□□ 0.33
CBWD2Q8IUF1 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC17.12■□□□□ 0.33
CBWD2Q8IUF1 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CBWD2Q8IUF1 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CBWD2Q8IUF1 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
CBWD2Q8IUF1 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CBWD2Q8IUF1 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
CBWD2Q8IUF1 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CBWD2Q8IUF1 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CBWD2Q8IUF1 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CBWD2Q8IUF1 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC17.12■□□□□ 0.33
CBWD2Q8IUF1 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CBWD2Q8IUF1 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC17.12■□□□□ 0.33
CBWD2Q8IUF1 AC015922.1-201ENST00000421102 1152 ntBASIC17.12■□□□□ 0.33
CBWD2Q8IUF1 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC17.12■□□□□ 0.33
CBWD2Q8IUF1 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CBWD2Q8IUF1 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CBWD2Q8IUF1 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC17.12■□□□□ 0.33
CBWD2Q8IUF1 REEP4-207ENST00000523293 913 ntTSL 3 BASIC17.12■□□□□ 0.33
CBWD2Q8IUF1 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
CBWD2Q8IUF1 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CBWD2Q8IUF1 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC17.12■□□□□ 0.33
CBWD2Q8IUF1 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
CBWD2Q8IUF1 AC092337.1-201ENST00000568699 1129 ntBASIC17.12■□□□□ 0.33
CBWD2Q8IUF1 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC17.12■□□□□ 0.33
CBWD2Q8IUF1 AC011467.4-201ENST00000594891 528 ntBASIC17.12■□□□□ 0.33
CBWD2Q8IUF1 SRD5A3P1-201ENST00000603021 949 ntBASIC17.12■□□□□ 0.33
CBWD2Q8IUF1 RNA5-8SN1-201ENST00000610460 153 ntBASIC17.12■□□□□ 0.33
CBWD2Q8IUF1 RNA5-8SN5-202ENST00000612463 153 ntBASIC17.12■□□□□ 0.33
CBWD2Q8IUF1 RNA5-8SN4-201ENST00000613359 153 ntBASIC17.12■□□□□ 0.33
CBWD2Q8IUF1 RNA5-8SN5-201ENST00000619471 153 ntBASIC17.12■□□□□ 0.33
CBWD2Q8IUF1 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CBWD2Q8IUF1 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
CBWD2Q8IUF1 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
CBWD2Q8IUF1 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CBWD2Q8IUF1 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CBWD2Q8IUF1 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CBWD2Q8IUF1 LCK-206ENST00000373564 2137 ntTSL 5 BASIC17.12■□□□□ 0.33
CBWD2Q8IUF1 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC17.12■□□□□ 0.33
CBWD2Q8IUF1 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC17.12■□□□□ 0.33
CBWD2Q8IUF1 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CBWD2Q8IUF1 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CBWD2Q8IUF1 TDG-209ENST00000544861 1387 ntTSL 2 BASIC17.12■□□□□ 0.33
CBWD2Q8IUF1 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
CBWD2Q8IUF1 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CBWD2Q8IUF1 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CBWD2Q8IUF1 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC17.12■□□□□ 0.33
CBWD2Q8IUF1 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC17.12■□□□□ 0.33
CBWD2Q8IUF1 SSR4P1-203ENST00000599569 2260 ntBASIC17.12■□□□□ 0.33
CBWD2Q8IUF1 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CBWD2Q8IUF1 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC17.11■□□□□ 0.33
CBWD2Q8IUF1 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms