Protein–RNA interactions for Protein: Q86VH4

LRRTM4, Leucine-rich repeat transmembrane neuronal protein 4, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4Q86VH4 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC15.5■□□□□ 0.07
LRRTM4Q86VH4 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LRRTM4Q86VH4 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
LRRTM4Q86VH4 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
LRRTM4Q86VH4 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
LRRTM4Q86VH4 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
LRRTM4Q86VH4 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC15.49■□□□□ 0.07
LRRTM4Q86VH4 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
LRRTM4Q86VH4 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
LRRTM4Q86VH4 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
LRRTM4Q86VH4 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
LRRTM4Q86VH4 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
LRRTM4Q86VH4 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC15.49■□□□□ 0.07
LRRTM4Q86VH4 AC138969.3-201ENST00000546612 1459 ntBASIC15.49■□□□□ 0.07
LRRTM4Q86VH4 AC138932.2-201ENST00000548268 1459 ntBASIC15.49■□□□□ 0.07
LRRTM4Q86VH4 AC126755.4-201ENST00000549796 1459 ntBASIC15.49■□□□□ 0.07
LRRTM4Q86VH4 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
LRRTM4Q86VH4 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC15.49■□□□□ 0.07
LRRTM4Q86VH4 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC15.49■□□□□ 0.07
LRRTM4Q86VH4 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
LRRTM4Q86VH4 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
LRRTM4Q86VH4 TAF8-206ENST00000472818 719 ntTSL 2 BASIC15.49■□□□□ 0.07
LRRTM4Q86VH4 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
LRRTM4Q86VH4 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC15.49■□□□□ 0.07
LRRTM4Q86VH4 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC15.49■□□□□ 0.07
LRRTM4Q86VH4 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC15.49■□□□□ 0.07
LRRTM4Q86VH4 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC15.49■□□□□ 0.07
LRRTM4Q86VH4 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC15.49■□□□□ 0.07
LRRTM4Q86VH4 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC15.49■□□□□ 0.07
LRRTM4Q86VH4 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC15.49■□□□□ 0.07
LRRTM4Q86VH4 AL158212.4-201ENST00000624062 1286 ntBASIC15.49■□□□□ 0.07
LRRTM4Q86VH4 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC15.49■□□□□ 0.07
LRRTM4Q86VH4 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC15.49■□□□□ 0.07
LRRTM4Q86VH4 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC15.49■□□□□ 0.07
LRRTM4Q86VH4 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
LRRTM4Q86VH4 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
LRRTM4Q86VH4 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC15.49■□□□□ 0.07
LRRTM4Q86VH4 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
LRRTM4Q86VH4 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
LRRTM4Q86VH4 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
LRRTM4Q86VH4 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
LRRTM4Q86VH4 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC15.49■□□□□ 0.07
LRRTM4Q86VH4 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
LRRTM4Q86VH4 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC15.48■□□□□ 0.07
LRRTM4Q86VH4 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
LRRTM4Q86VH4 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
LRRTM4Q86VH4 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
LRRTM4Q86VH4 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
LRRTM4Q86VH4 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC15.48■□□□□ 0.07
LRRTM4Q86VH4 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
LRRTM4Q86VH4 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
LRRTM4Q86VH4 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
LRRTM4Q86VH4 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
LRRTM4Q86VH4 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
LRRTM4Q86VH4 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
LRRTM4Q86VH4 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
LRRTM4Q86VH4 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
LRRTM4Q86VH4 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC15.48■□□□□ 0.07
LRRTM4Q86VH4 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
LRRTM4Q86VH4 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
LRRTM4Q86VH4 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
LRRTM4Q86VH4 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC15.48■□□□□ 0.07
LRRTM4Q86VH4 TP53TG3HP-202ENST00000569755 579 ntBASIC15.48■□□□□ 0.07
LRRTM4Q86VH4 AC036164.1-201ENST00000570544 333 ntBASIC15.48■□□□□ 0.07
LRRTM4Q86VH4 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
LRRTM4Q86VH4 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
LRRTM4Q86VH4 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
LRRTM4Q86VH4 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
LRRTM4Q86VH4 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC15.48■□□□□ 0.07
LRRTM4Q86VH4 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
LRRTM4Q86VH4 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
LRRTM4Q86VH4 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
LRRTM4Q86VH4 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
LRRTM4Q86VH4 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
LRRTM4Q86VH4 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
LRRTM4Q86VH4 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
LRRTM4Q86VH4 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
LRRTM4Q86VH4 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
LRRTM4Q86VH4 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC15.48■□□□□ 0.07
LRRTM4Q86VH4 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC15.48■□□□□ 0.07
LRRTM4Q86VH4 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
LRRTM4Q86VH4 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
LRRTM4Q86VH4 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
LRRTM4Q86VH4 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
LRRTM4Q86VH4 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC15.47■□□□□ 0.07
LRRTM4Q86VH4 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC15.47■□□□□ 0.07
LRRTM4Q86VH4 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
LRRTM4Q86VH4 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
LRRTM4Q86VH4 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
LRRTM4Q86VH4 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC15.47■□□□□ 0.07
LRRTM4Q86VH4 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
LRRTM4Q86VH4 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
LRRTM4Q86VH4 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
LRRTM4Q86VH4 AL365203.3-201ENST00000609742 2057 ntBASIC15.47■□□□□ 0.07
LRRTM4Q86VH4 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
LRRTM4Q86VH4 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC15.47■□□□□ 0.07
LRRTM4Q86VH4 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
LRRTM4Q86VH4 ING5-213ENST00000636051 4199 ntTSL 5 BASIC15.47■□□□□ 0.07
LRRTM4Q86VH4 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
LRRTM4Q86VH4 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 79.3 ms