Protein–RNA interactions for Protein: Q5VT99

LRRC38, Leucine-rich repeat-containing protein 38, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC38Q5VT99 AP006288.1-201ENST00000446065 395 ntBASIC16.39■□□□□ 0.21
LRRC38Q5VT99 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC16.39■□□□□ 0.21
LRRC38Q5VT99 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC16.39■□□□□ 0.21
LRRC38Q5VT99 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC16.39■□□□□ 0.21
LRRC38Q5VT99 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC16.39■□□□□ 0.21
LRRC38Q5VT99 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
LRRC38Q5VT99 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
LRRC38Q5VT99 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC16.39■□□□□ 0.21
LRRC38Q5VT99 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LRRC38Q5VT99 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC16.39■□□□□ 0.21
LRRC38Q5VT99 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LRRC38Q5VT99 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
LRRC38Q5VT99 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC16.39■□□□□ 0.21
LRRC38Q5VT99 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
LRRC38Q5VT99 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LRRC38Q5VT99 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LRRC38Q5VT99 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC16.39■□□□□ 0.21
LRRC38Q5VT99 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC16.39■□□□□ 0.21
LRRC38Q5VT99 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
LRRC38Q5VT99 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
LRRC38Q5VT99 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
LRRC38Q5VT99 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
LRRC38Q5VT99 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LRRC38Q5VT99 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC16.38■□□□□ 0.21
LRRC38Q5VT99 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LRRC38Q5VT99 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LRRC38Q5VT99 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
LRRC38Q5VT99 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
LRRC38Q5VT99 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
LRRC38Q5VT99 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC16.38■□□□□ 0.21
LRRC38Q5VT99 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC16.38■□□□□ 0.21
LRRC38Q5VT99 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LRRC38Q5VT99 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
LRRC38Q5VT99 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LRRC38Q5VT99 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
LRRC38Q5VT99 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
LRRC38Q5VT99 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LRRC38Q5VT99 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
LRRC38Q5VT99 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
LRRC38Q5VT99 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC16.38■□□□□ 0.21
LRRC38Q5VT99 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
LRRC38Q5VT99 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
LRRC38Q5VT99 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC16.38■□□□□ 0.21
LRRC38Q5VT99 MTND6P24-201ENST00000440466 518 ntBASIC16.38■□□□□ 0.21
LRRC38Q5VT99 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC16.38■□□□□ 0.21
LRRC38Q5VT99 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC16.38■□□□□ 0.21
LRRC38Q5VT99 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
LRRC38Q5VT99 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC16.38■□□□□ 0.21
LRRC38Q5VT99 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC16.38■□□□□ 0.21
LRRC38Q5VT99 MIR6080-201ENST00000617359 66 ntBASIC16.38■□□□□ 0.21
LRRC38Q5VT99 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LRRC38Q5VT99 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LRRC38Q5VT99 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
LRRC38Q5VT99 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LRRC38Q5VT99 AC084364.1-201ENST00000551967 1556 ntBASIC16.38■□□□□ 0.21
LRRC38Q5VT99 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LRRC38Q5VT99 GOLGA6L17P-202ENST00000614358 1398 ntBASIC16.38■□□□□ 0.21
LRRC38Q5VT99 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
LRRC38Q5VT99 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LRRC38Q5VT99 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC16.38■□□□□ 0.21
LRRC38Q5VT99 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
LRRC38Q5VT99 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC16.37■□□□□ 0.21
LRRC38Q5VT99 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
LRRC38Q5VT99 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC16.37■□□□□ 0.21
LRRC38Q5VT99 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LRRC38Q5VT99 AC023024.2-201ENST00000623561 1993 ntBASIC16.37■□□□□ 0.21
LRRC38Q5VT99 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
LRRC38Q5VT99 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
LRRC38Q5VT99 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
LRRC38Q5VT99 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC16.37■□□□□ 0.21
LRRC38Q5VT99 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
LRRC38Q5VT99 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC16.37■□□□□ 0.21
LRRC38Q5VT99 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
LRRC38Q5VT99 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC16.37■□□□□ 0.21
LRRC38Q5VT99 AL080243.2-201ENST00000418783 582 ntBASIC16.37■□□□□ 0.21
LRRC38Q5VT99 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC16.37■□□□□ 0.21
LRRC38Q5VT99 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC16.37■□□□□ 0.21
LRRC38Q5VT99 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC16.37■□□□□ 0.21
LRRC38Q5VT99 DHDH-204ENST00000523250 634 ntTSL 5 BASIC16.37■□□□□ 0.21
LRRC38Q5VT99 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC16.37■□□□□ 0.21
LRRC38Q5VT99 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC16.37■□□□□ 0.21
LRRC38Q5VT99 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC16.37■□□□□ 0.21
LRRC38Q5VT99 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC16.37■□□□□ 0.21
LRRC38Q5VT99 COQ4-205ENST00000609948 956 ntTSL 2 BASIC16.37■□□□□ 0.21
LRRC38Q5VT99 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
LRRC38Q5VT99 MIR6069-201ENST00000620069 79 ntBASIC16.37■□□□□ 0.21
LRRC38Q5VT99 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
LRRC38Q5VT99 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LRRC38Q5VT99 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LRRC38Q5VT99 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LRRC38Q5VT99 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LRRC38Q5VT99 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC16.37■□□□□ 0.21
LRRC38Q5VT99 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
LRRC38Q5VT99 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LRRC38Q5VT99 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LRRC38Q5VT99 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LRRC38Q5VT99 CELP-203ENST00000624767 2414 ntTSL 5 BASIC16.37■□□□□ 0.21
LRRC38Q5VT99 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LRRC38Q5VT99 Z97205.2-201ENST00000564697 1639 ntBASIC16.37■□□□□ 0.21
LRRC38Q5VT99 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms