Protein–RNA interactions for Protein: Q53SF7

COBLL1, Cordon-bleu protein-like 1, humanhuman

Predictions only

Length 1,204 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COBLL1Q53SF7 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
COBLL1Q53SF7 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
COBLL1Q53SF7 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
COBLL1Q53SF7 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
COBLL1Q53SF7 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC17.3■□□□□ 0.36
COBLL1Q53SF7 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
COBLL1Q53SF7 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
COBLL1Q53SF7 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
COBLL1Q53SF7 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
COBLL1Q53SF7 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
COBLL1Q53SF7 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC17.3■□□□□ 0.36
COBLL1Q53SF7 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
COBLL1Q53SF7 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
COBLL1Q53SF7 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
COBLL1Q53SF7 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
COBLL1Q53SF7 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
COBLL1Q53SF7 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
COBLL1Q53SF7 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC17.29■□□□□ 0.36
COBLL1Q53SF7 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
COBLL1Q53SF7 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC17.29■□□□□ 0.36
COBLL1Q53SF7 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
COBLL1Q53SF7 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
COBLL1Q53SF7 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
COBLL1Q53SF7 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
COBLL1Q53SF7 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
COBLL1Q53SF7 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
COBLL1Q53SF7 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
COBLL1Q53SF7 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
COBLL1Q53SF7 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC17.29■□□□□ 0.36
COBLL1Q53SF7 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC17.29■□□□□ 0.36
COBLL1Q53SF7 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
COBLL1Q53SF7 AL133267.1-201ENST00000398220 340 ntBASIC17.29■□□□□ 0.36
COBLL1Q53SF7 GHSR-202ENST00000427970 912 ntBASIC17.29■□□□□ 0.36
COBLL1Q53SF7 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC17.29■□□□□ 0.36
COBLL1Q53SF7 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC17.29■□□□□ 0.36
COBLL1Q53SF7 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC17.29■□□□□ 0.36
COBLL1Q53SF7 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC17.29■□□□□ 0.36
COBLL1Q53SF7 AC109322.1-201ENST00000524499 1264 ntBASIC17.29■□□□□ 0.36
COBLL1Q53SF7 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC17.29■□□□□ 0.36
COBLL1Q53SF7 DAD1-205ENST00000543337 501 ntTSL 3 BASIC17.29■□□□□ 0.36
COBLL1Q53SF7 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
COBLL1Q53SF7 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC17.29■□□□□ 0.36
COBLL1Q53SF7 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC17.29■□□□□ 0.36
COBLL1Q53SF7 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
COBLL1Q53SF7 AC091951.1-201ENST00000512854 2465 ntBASIC17.29■□□□□ 0.36
COBLL1Q53SF7 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
COBLL1Q53SF7 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
COBLL1Q53SF7 MFF-204ENST00000353339 2186 ntTSL 5 BASIC17.29■□□□□ 0.36
COBLL1Q53SF7 DEK-201ENST00000244776 1441 ntTSL 2 BASIC17.29■□□□□ 0.36
COBLL1Q53SF7 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
COBLL1Q53SF7 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC17.29■□□□□ 0.36
COBLL1Q53SF7 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
COBLL1Q53SF7 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
COBLL1Q53SF7 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
COBLL1Q53SF7 AMT-224ENST00000635808 1610 ntTSL 5 BASIC17.29■□□□□ 0.36
COBLL1Q53SF7 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
COBLL1Q53SF7 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
COBLL1Q53SF7 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC17.28■□□□□ 0.36
COBLL1Q53SF7 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
COBLL1Q53SF7 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC17.28■□□□□ 0.36
COBLL1Q53SF7 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC17.28■□□□□ 0.36
COBLL1Q53SF7 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC17.28■□□□□ 0.36
COBLL1Q53SF7 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
COBLL1Q53SF7 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC17.28■□□□□ 0.36
COBLL1Q53SF7 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC17.28■□□□□ 0.36
COBLL1Q53SF7 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
COBLL1Q53SF7 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
COBLL1Q53SF7 AL139400.1-201ENST00000366220 510 ntBASIC17.28■□□□□ 0.36
COBLL1Q53SF7 TOMM22P5-201ENST00000416399 439 ntBASIC17.28■□□□□ 0.36
COBLL1Q53SF7 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC17.28■□□□□ 0.36
COBLL1Q53SF7 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC17.28■□□□□ 0.36
COBLL1Q53SF7 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
COBLL1Q53SF7 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC17.28■□□□□ 0.36
COBLL1Q53SF7 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC17.28■□□□□ 0.36
COBLL1Q53SF7 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
COBLL1Q53SF7 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC17.28■□□□□ 0.36
COBLL1Q53SF7 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
COBLL1Q53SF7 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
COBLL1Q53SF7 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC17.28■□□□□ 0.36
COBLL1Q53SF7 TEX28P1-201ENST00000613479 1221 ntBASIC17.28■□□□□ 0.36
COBLL1Q53SF7 TEX28P2-201ENST00000617764 1221 ntBASIC17.28■□□□□ 0.36
COBLL1Q53SF7 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
COBLL1Q53SF7 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC17.28■□□□□ 0.36
COBLL1Q53SF7 POR-201ENST00000394893 2532 ntTSL 5 BASIC17.28■□□□□ 0.36
COBLL1Q53SF7 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC17.28■□□□□ 0.36
COBLL1Q53SF7 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
COBLL1Q53SF7 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
COBLL1Q53SF7 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
COBLL1Q53SF7 LINC01101-201ENST00000622953 1884 ntBASIC17.28■□□□□ 0.36
COBLL1Q53SF7 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
COBLL1Q53SF7 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC17.28■□□□□ 0.36
COBLL1Q53SF7 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
COBLL1Q53SF7 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
COBLL1Q53SF7 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
COBLL1Q53SF7 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
COBLL1Q53SF7 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
COBLL1Q53SF7 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
COBLL1Q53SF7 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC17.28■□□□□ 0.36
COBLL1Q53SF7 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
COBLL1Q53SF7 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 123.4 ms