Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
SCN1BQ07699 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SCN1BQ07699 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SCN1BQ07699 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SCN1BQ07699 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
SCN1BQ07699 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SCN1BQ07699 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SCN1BQ07699 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC14.18□□□□□ -0.14
SCN1BQ07699 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
SCN1BQ07699 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC14.18□□□□□ -0.14
SCN1BQ07699 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC14.18□□□□□ -0.14
SCN1BQ07699 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC14.18□□□□□ -0.14
SCN1BQ07699 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SCN1BQ07699 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SCN1BQ07699 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SCN1BQ07699 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
SCN1BQ07699 ELK2BP-201ENST00000415014 1224 ntBASIC14.18□□□□□ -0.14
SCN1BQ07699 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC14.18□□□□□ -0.14
SCN1BQ07699 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC14.18□□□□□ -0.14
SCN1BQ07699 PAM16-208ENST00000573553 722 ntTSL 2 BASIC14.18□□□□□ -0.14
SCN1BQ07699 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC14.18□□□□□ -0.14
SCN1BQ07699 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC14.18□□□□□ -0.14
SCN1BQ07699 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
SCN1BQ07699 AC010654.1-201ENST00000615722 808 ntBASIC14.18□□□□□ -0.14
SCN1BQ07699 HADH-212ENST00000638621 741 ntTSL 5 BASIC14.18□□□□□ -0.14
SCN1BQ07699 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC14.18□□□□□ -0.14
SCN1BQ07699 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC14.18□□□□□ -0.14
SCN1BQ07699 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SCN1BQ07699 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
SCN1BQ07699 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC14.18□□□□□ -0.14
SCN1BQ07699 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
SCN1BQ07699 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
SCN1BQ07699 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SCN1BQ07699 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SCN1BQ07699 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SCN1BQ07699 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SCN1BQ07699 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
SCN1BQ07699 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SCN1BQ07699 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SCN1BQ07699 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC14.18□□□□□ -0.14
SCN1BQ07699 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SCN1BQ07699 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SCN1BQ07699 OS9-204ENST00000389146 2091 ntTSL 2 BASIC14.18□□□□□ -0.14
SCN1BQ07699 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
SCN1BQ07699 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SCN1BQ07699 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SCN1BQ07699 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SCN1BQ07699 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
SCN1BQ07699 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SCN1BQ07699 OS9-207ENST00000439210 1946 ntTSL 2 BASIC14.17□□□□□ -0.14
SCN1BQ07699 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC14.17□□□□□ -0.14
SCN1BQ07699 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC14.17□□□□□ -0.14
SCN1BQ07699 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC14.17□□□□□ -0.14
SCN1BQ07699 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SCN1BQ07699 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC14.17□□□□□ -0.14
SCN1BQ07699 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
SCN1BQ07699 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
SCN1BQ07699 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
SCN1BQ07699 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC14.17□□□□□ -0.14
SCN1BQ07699 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC14.17□□□□□ -0.14
SCN1BQ07699 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SCN1BQ07699 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SCN1BQ07699 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SCN1BQ07699 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SCN1BQ07699 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SCN1BQ07699 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SCN1BQ07699 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC14.17□□□□□ -0.14
SCN1BQ07699 LAGE3P1-201ENST00000425356 484 ntBASIC14.17□□□□□ -0.14
SCN1BQ07699 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SCN1BQ07699 PAWRP1-201ENST00000451083 565 ntBASIC14.17□□□□□ -0.14
SCN1BQ07699 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
SCN1BQ07699 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC14.17□□□□□ -0.14
SCN1BQ07699 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SCN1BQ07699 UNC93B7-201ENST00000509439 705 ntBASIC14.17□□□□□ -0.14
SCN1BQ07699 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC14.17□□□□□ -0.14
SCN1BQ07699 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC14.17□□□□□ -0.14
SCN1BQ07699 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC14.17□□□□□ -0.14
SCN1BQ07699 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SCN1BQ07699 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SCN1BQ07699 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SCN1BQ07699 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SCN1BQ07699 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
SCN1BQ07699 ABR-228ENST00000574437 3196 ntTSL 5 BASIC14.17□□□□□ -0.14
SCN1BQ07699 AC090616.6-203ENST00000579186 1945 ntBASIC14.17□□□□□ -0.14
SCN1BQ07699 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SCN1BQ07699 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
SCN1BQ07699 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
SCN1BQ07699 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SCN1BQ07699 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SCN1BQ07699 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SCN1BQ07699 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC14.17□□□□□ -0.14
SCN1BQ07699 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SCN1BQ07699 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SCN1BQ07699 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
SCN1BQ07699 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC14.17□□□□□ -0.14
SCN1BQ07699 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC14.17□□□□□ -0.14
SCN1BQ07699 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
SCN1BQ07699 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC14.16□□□□□ -0.14
SCN1BQ07699 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SCN1BQ07699 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms