Protein–RNA interactions for Protein: Q02223

TNFRSF17, Tumor necrosis factor receptor superfamily member 17, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF17Q02223 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC14.91□□□□□ -0.02
TNFRSF17Q02223 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
TNFRSF17Q02223 AC074338.1-201ENST00000416825 156 ntBASIC14.91□□□□□ -0.02
TNFRSF17Q02223 TSSK5P-201ENST00000423978 907 ntBASIC14.91□□□□□ -0.02
TNFRSF17Q02223 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TNFRSF17Q02223 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC14.91□□□□□ -0.02
TNFRSF17Q02223 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
TNFRSF17Q02223 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC14.91□□□□□ -0.02
TNFRSF17Q02223 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC14.91□□□□□ -0.02
TNFRSF17Q02223 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC14.91□□□□□ -0.02
TNFRSF17Q02223 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC14.91□□□□□ -0.02
TNFRSF17Q02223 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC14.91□□□□□ -0.02
TNFRSF17Q02223 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC14.91□□□□□ -0.02
TNFRSF17Q02223 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC14.91□□□□□ -0.02
TNFRSF17Q02223 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TNFRSF17Q02223 AC020658.6-201ENST00000623564 1870 ntBASIC14.91□□□□□ -0.02
TNFRSF17Q02223 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TNFRSF17Q02223 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TNFRSF17Q02223 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TNFRSF17Q02223 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
TNFRSF17Q02223 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC14.9□□□□□ -0.02
TNFRSF17Q02223 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
TNFRSF17Q02223 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
TNFRSF17Q02223 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
TNFRSF17Q02223 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
TNFRSF17Q02223 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TNFRSF17Q02223 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TNFRSF17Q02223 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
TNFRSF17Q02223 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC14.9□□□□□ -0.02
TNFRSF17Q02223 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TNFRSF17Q02223 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TNFRSF17Q02223 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC14.9□□□□□ -0.02
TNFRSF17Q02223 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
TNFRSF17Q02223 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC14.9□□□□□ -0.02
TNFRSF17Q02223 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC14.9□□□□□ -0.02
TNFRSF17Q02223 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC14.9□□□□□ -0.02
TNFRSF17Q02223 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC14.9□□□□□ -0.02
TNFRSF17Q02223 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC14.9□□□□□ -0.02
TNFRSF17Q02223 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC14.9□□□□□ -0.02
TNFRSF17Q02223 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC14.9□□□□□ -0.02
TNFRSF17Q02223 SLED1-202ENST00000512051 380 ntBASIC14.9□□□□□ -0.02
TNFRSF17Q02223 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC14.9□□□□□ -0.02
TNFRSF17Q02223 SDHAP3-202ENST00000515467 728 ntBASIC14.9□□□□□ -0.02
TNFRSF17Q02223 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TNFRSF17Q02223 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC14.9□□□□□ -0.02
TNFRSF17Q02223 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC14.9□□□□□ -0.02
TNFRSF17Q02223 SSH2-210ENST00000582084 560 ntTSL 3 BASIC14.9□□□□□ -0.02
TNFRSF17Q02223 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC14.9□□□□□ -0.02
TNFRSF17Q02223 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC14.9□□□□□ -0.02
TNFRSF17Q02223 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC14.9□□□□□ -0.02
TNFRSF17Q02223 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC14.9□□□□□ -0.02
TNFRSF17Q02223 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC14.9□□□□□ -0.02
TNFRSF17Q02223 AL109936.8-201ENST00000641772 604 ntBASIC14.9□□□□□ -0.02
TNFRSF17Q02223 AMT-233ENST00000636522 1620 ntTSL 2 BASIC14.9□□□□□ -0.02
TNFRSF17Q02223 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
TNFRSF17Q02223 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC14.9□□□□□ -0.02
TNFRSF17Q02223 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TNFRSF17Q02223 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
TNFRSF17Q02223 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
TNFRSF17Q02223 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TNFRSF17Q02223 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
TNFRSF17Q02223 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TNFRSF17Q02223 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TNFRSF17Q02223 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
TNFRSF17Q02223 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC14.9□□□□□ -0.02
TNFRSF17Q02223 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TNFRSF17Q02223 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TNFRSF17Q02223 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
TNFRSF17Q02223 ING5-213ENST00000636051 4199 ntTSL 5 BASIC14.9□□□□□ -0.02
TNFRSF17Q02223 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC14.9□□□□□ -0.02
TNFRSF17Q02223 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TNFRSF17Q02223 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
TNFRSF17Q02223 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
TNFRSF17Q02223 AC127383.1-201ENST00000444697 1800 ntBASIC14.89□□□□□ -0.03
TNFRSF17Q02223 AC105250.1-201ENST00000509378 2057 ntBASIC14.89□□□□□ -0.03
TNFRSF17Q02223 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TNFRSF17Q02223 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC14.89□□□□□ -0.03
TNFRSF17Q02223 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC14.89□□□□□ -0.03
TNFRSF17Q02223 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC14.89□□□□□ -0.03
TNFRSF17Q02223 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TNFRSF17Q02223 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TNFRSF17Q02223 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TNFRSF17Q02223 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC14.89□□□□□ -0.03
TNFRSF17Q02223 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TNFRSF17Q02223 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC14.89□□□□□ -0.03
TNFRSF17Q02223 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TNFRSF17Q02223 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC14.89□□□□□ -0.03
TNFRSF17Q02223 RAD18-204ENST00000418463 563 ntTSL 4 BASIC14.89□□□□□ -0.03
TNFRSF17Q02223 RAD18-205ENST00000421052 582 ntTSL 3 BASIC14.89□□□□□ -0.03
TNFRSF17Q02223 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC14.89□□□□□ -0.03
TNFRSF17Q02223 BASP1P1-201ENST00000430708 665 ntBASIC14.89□□□□□ -0.03
TNFRSF17Q02223 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC14.89□□□□□ -0.03
TNFRSF17Q02223 AC009477.1-201ENST00000452936 217 ntBASIC14.89□□□□□ -0.03
TNFRSF17Q02223 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC14.89□□□□□ -0.03
TNFRSF17Q02223 AC093214.1-201ENST00000511688 1107 ntBASIC14.89□□□□□ -0.03
TNFRSF17Q02223 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC14.89□□□□□ -0.03
TNFRSF17Q02223 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC14.89□□□□□ -0.03
TNFRSF17Q02223 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC14.89□□□□□ -0.03
TNFRSF17Q02223 AC044860.1-202ENST00000559481 777 ntBASIC14.89□□□□□ -0.03
TNFRSF17Q02223 CMC2-214ENST00000565925 640 ntTSL 5 BASIC14.89□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms