Protein–RNA interactions for Protein: P83916

CBX1, Chromobox protein homolog 1, humanhuman

Predictions only

Length 185 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P83916 FAM171B-201ENST00000304698 5826 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CBX1P83916 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CBX1P83916 HSD17B4-201ENST00000256216 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CBX1P83916 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
CBX1P83916 GULP1-207ENST00000409843 2643 ntAPPRIS ALT1 TSL 2 BASIC16.56■□□□□ 0.24
CBX1P83916 AC051649.2-201ENST00000640310 3319 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
CBX1P83916 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
CBX1P83916 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CBX1P83916 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CBX1P83916 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CBX1P83916 APBA2-212ENST00000561069 3138 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
CBX1P83916 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CBX1P83916 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC16.56■□□□□ 0.24
CBX1P83916 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CBX1P83916 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CBX1P83916 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CBX1P83916 STRN-202ENST00000379213 2254 ntTSL 5 BASIC16.56■□□□□ 0.24
CBX1P83916 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC16.55■□□□□ 0.24
CBX1P83916 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC16.55■□□□□ 0.24
CBX1P83916 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
CBX1P83916 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CBX1P83916 NR4A2-209ENST00000426264 2642 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CBX1P83916 GNPDA1-204ENST00000503794 2622 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CBX1P83916 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CBX1P83916 CCDC88C-201ENST00000331194 3104 ntTSL 5 BASIC16.55■□□□□ 0.24
CBX1P83916 COL6A2-203ENST00000397763 3101 ntTSL 5 BASIC16.55■□□□□ 0.24
CBX1P83916 DAB2IP-202ENST00000309989 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CBX1P83916 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CBX1P83916 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CBX1P83916 TOLLIP-203ENST00000525159 3429 ntTSL 2 BASIC16.55■□□□□ 0.24
CBX1P83916 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC16.55■□□□□ 0.24
CBX1P83916 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
CBX1P83916 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CBX1P83916 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CBX1P83916 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC16.55■□□□□ 0.24
CBX1P83916 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CBX1P83916 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC16.55■□□□□ 0.24
CBX1P83916 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC16.55■□□□□ 0.24
CBX1P83916 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC16.55■□□□□ 0.24
CBX1P83916 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CBX1P83916 AC097488.1-201ENST00000507834 756 ntBASIC16.55■□□□□ 0.24
CBX1P83916 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC16.55■□□□□ 0.24
CBX1P83916 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC16.55■□□□□ 0.24
CBX1P83916 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CBX1P83916 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC16.55■□□□□ 0.24
CBX1P83916 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CBX1P83916 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC16.55■□□□□ 0.24
CBX1P83916 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC16.55■□□□□ 0.24
CBX1P83916 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC16.55■□□□□ 0.24
CBX1P83916 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
CBX1P83916 HAGLR-202ENST00000416928 4235 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CBX1P83916 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
CBX1P83916 AAR2-202ENST00000373932 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CBX1P83916 PFKP-203ENST00000381125 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CBX1P83916 ABR-205ENST00000544583 5595 ntTSL 2 BASIC16.55■□□□□ 0.24
CBX1P83916 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CBX1P83916 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC16.55■□□□□ 0.24
CBX1P83916 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CBX1P83916 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CBX1P83916 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CBX1P83916 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CBX1P83916 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC16.55■□□□□ 0.24
CBX1P83916 PCDHA11-202ENST00000616325 3418 ntAPPRIS ALT2 BASIC16.55■□□□□ 0.24
CBX1P83916 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
CBX1P83916 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CBX1P83916 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC16.55■□□□□ 0.24
CBX1P83916 AC020658.7-201ENST00000624274 2442 ntBASIC16.55■□□□□ 0.24
CBX1P83916 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
CBX1P83916 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CBX1P83916 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CBX1P83916 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
CBX1P83916 KRT89P-201ENST00000620027 1478 ntBASIC16.54■□□□□ 0.24
CBX1P83916 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CBX1P83916 MYADM-201ENST00000336967 3047 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
CBX1P83916 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC16.54■□□□□ 0.24
CBX1P83916 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC16.54■□□□□ 0.24
CBX1P83916 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CBX1P83916 HJURP-207ENST00000441687 2934 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
CBX1P83916 AOC1-204ENST00000467291 2857 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
CBX1P83916 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
CBX1P83916 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
CBX1P83916 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
CBX1P83916 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
CBX1P83916 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CBX1P83916 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CBX1P83916 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CBX1P83916 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CBX1P83916 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CBX1P83916 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC16.54■□□□□ 0.24
CBX1P83916 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CBX1P83916 FAM197Y1-201ENST00000421178 764 ntBASIC16.54■□□□□ 0.24
CBX1P83916 FAM8A3P-201ENST00000427218 844 ntBASIC16.54■□□□□ 0.24
CBX1P83916 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CBX1P83916 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC16.54■□□□□ 0.24
CBX1P83916 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC16.54■□□□□ 0.24
CBX1P83916 LINC01238-205ENST00000567549 1107 ntBASIC16.54■□□□□ 0.24
CBX1P83916 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
CBX1P83916 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC16.54■□□□□ 0.24
CBX1P83916 TUBGCP4-201ENST00000260383 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CBX1P83916 FER1L4-204ENST00000430275 3281 ntTSL 5 BASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms