Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 VPS29-207ENST00000549970 818 ntTSL 3 BASIC14.97□□□□□ -0.01
RAE1P78406 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
RAE1P78406 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC14.97□□□□□ -0.01
RAE1P78406 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC14.97□□□□□ -0.01
RAE1P78406 CMC2-214ENST00000565925 640 ntTSL 5 BASIC14.97□□□□□ -0.01
RAE1P78406 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC14.97□□□□□ -0.01
RAE1P78406 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC14.97□□□□□ -0.01
RAE1P78406 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC14.97□□□□□ -0.01
RAE1P78406 Z92544.3-201ENST00000624747 417 ntBASIC14.97□□□□□ -0.01
RAE1P78406 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
RAE1P78406 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RAE1P78406 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RAE1P78406 STRN-202ENST00000379213 2254 ntTSL 5 BASIC14.97□□□□□ -0.01
RAE1P78406 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC14.97□□□□□ -0.01
RAE1P78406 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC14.97□□□□□ -0.01
RAE1P78406 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RAE1P78406 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RAE1P78406 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC14.97□□□□□ -0.01
RAE1P78406 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RAE1P78406 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC14.97□□□□□ -0.01
RAE1P78406 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
RAE1P78406 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC14.97□□□□□ -0.01
RAE1P78406 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RAE1P78406 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
RAE1P78406 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RAE1P78406 AC023024.2-201ENST00000623561 1993 ntBASIC14.96□□□□□ -0.01
RAE1P78406 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
RAE1P78406 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
RAE1P78406 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RAE1P78406 AC148477.4-201ENST00000613430 1793 ntBASIC14.96□□□□□ -0.01
RAE1P78406 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC14.96□□□□□ -0.01
RAE1P78406 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC14.96□□□□□ -0.01
RAE1P78406 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RAE1P78406 PARN-202ENST00000420015 2360 ntTSL 2 BASIC14.96□□□□□ -0.01
RAE1P78406 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RAE1P78406 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
RAE1P78406 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
RAE1P78406 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RAE1P78406 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
RAE1P78406 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
RAE1P78406 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
RAE1P78406 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
RAE1P78406 TSEN15P1-201ENST00000423257 515 ntBASIC14.96□□□□□ -0.01
RAE1P78406 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC14.96□□□□□ -0.01
RAE1P78406 KRT18P64-201ENST00000434946 1219 ntBASIC14.96□□□□□ -0.01
RAE1P78406 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RAE1P78406 SLBP-205ENST00000488267 987 ntTSL 2 BASIC14.96□□□□□ -0.01
RAE1P78406 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC14.96□□□□□ -0.01
RAE1P78406 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC14.96□□□□□ -0.01
RAE1P78406 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
RAE1P78406 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC14.96□□□□□ -0.01
RAE1P78406 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
RAE1P78406 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
RAE1P78406 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
RAE1P78406 SPDYE12P-201ENST00000618416 771 ntBASIC14.96□□□□□ -0.01
RAE1P78406 AL033527.5-202ENST00000641632 1098 ntBASIC14.96□□□□□ -0.01
RAE1P78406 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
RAE1P78406 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
RAE1P78406 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RAE1P78406 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RAE1P78406 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RAE1P78406 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
RAE1P78406 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
RAE1P78406 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC14.96□□□□□ -0.02
RAE1P78406 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.02
RAE1P78406 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
RAE1P78406 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.02
RAE1P78406 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.02
RAE1P78406 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
RAE1P78406 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
RAE1P78406 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
RAE1P78406 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC14.95□□□□□ -0.02
RAE1P78406 Z97205.2-201ENST00000564697 1639 ntBASIC14.95□□□□□ -0.02
RAE1P78406 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
RAE1P78406 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RAE1P78406 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RAE1P78406 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
RAE1P78406 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RAE1P78406 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC14.95□□□□□ -0.02
RAE1P78406 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
RAE1P78406 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC14.95□□□□□ -0.02
RAE1P78406 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RAE1P78406 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
RAE1P78406 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC14.95□□□□□ -0.02
RAE1P78406 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
RAE1P78406 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC14.95□□□□□ -0.02
RAE1P78406 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
RAE1P78406 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
RAE1P78406 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
RAE1P78406 HNRNPFP1-201ENST00000391730 1133 ntBASIC14.95□□□□□ -0.02
RAE1P78406 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
RAE1P78406 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC14.95□□□□□ -0.02
RAE1P78406 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC14.95□□□□□ -0.02
RAE1P78406 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC14.95□□□□□ -0.02
RAE1P78406 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC14.95□□□□□ -0.02
RAE1P78406 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC14.95□□□□□ -0.02
RAE1P78406 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC14.95□□□□□ -0.02
RAE1P78406 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC14.95□□□□□ -0.02
RAE1P78406 AC025048.3-201ENST00000590609 569 ntBASIC14.95□□□□□ -0.02
RAE1P78406 AC005702.4-201ENST00000618393 416 ntBASIC14.95□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms