Protein–RNA interactions for Protein: P68133

ACTA1, Actin, alpha skeletal muscle, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTA1P68133 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC14.15□□□□□ -0.14
ACTA1P68133 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC14.15□□□□□ -0.14
ACTA1P68133 MIR4313-201ENST00000580760 101 ntBASIC14.15□□□□□ -0.14
ACTA1P68133 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
ACTA1P68133 MED16-214ENST00000617672 554 ntTSL 5 BASIC14.15□□□□□ -0.14
ACTA1P68133 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
ACTA1P68133 GSN-215ENST00000545652 2428 ntTSL 2 BASIC14.15□□□□□ -0.14
ACTA1P68133 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
ACTA1P68133 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
ACTA1P68133 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
ACTA1P68133 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ACTA1P68133 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
ACTA1P68133 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
ACTA1P68133 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC14.15□□□□□ -0.15
ACTA1P68133 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.15
ACTA1P68133 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC14.14□□□□□ -0.15
ACTA1P68133 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC14.14□□□□□ -0.15
ACTA1P68133 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC14.14□□□□□ -0.15
ACTA1P68133 STK33-217ENST00000534493 1895 ntTSL 2 BASIC14.14□□□□□ -0.15
ACTA1P68133 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC14.14□□□□□ -0.15
ACTA1P68133 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
ACTA1P68133 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ACTA1P68133 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
ACTA1P68133 CELP-203ENST00000624767 2414 ntTSL 5 BASIC14.14□□□□□ -0.15
ACTA1P68133 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ACTA1P68133 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
ACTA1P68133 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ACTA1P68133 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ACTA1P68133 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
ACTA1P68133 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
ACTA1P68133 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC14.14□□□□□ -0.15
ACTA1P68133 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
ACTA1P68133 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
ACTA1P68133 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
ACTA1P68133 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC14.14□□□□□ -0.15
ACTA1P68133 AC098831.1-202ENST00000438821 336 ntBASIC14.14□□□□□ -0.15
ACTA1P68133 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC14.14□□□□□ -0.15
ACTA1P68133 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC14.14□□□□□ -0.15
ACTA1P68133 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC14.14□□□□□ -0.15
ACTA1P68133 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC14.14□□□□□ -0.15
ACTA1P68133 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC14.14□□□□□ -0.15
ACTA1P68133 CALM3-211ENST00000598871 561 ntTSL 4 BASIC14.14□□□□□ -0.15
ACTA1P68133 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
ACTA1P68133 PRKN-208ENST00000610470 531 ntTSL 2 BASIC14.14□□□□□ -0.15
ACTA1P68133 PRKN-209ENST00000612485 225 ntTSL 5 BASIC14.14□□□□□ -0.15
ACTA1P68133 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
ACTA1P68133 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ACTA1P68133 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ACTA1P68133 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
ACTA1P68133 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ACTA1P68133 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC14.14□□□□□ -0.15
ACTA1P68133 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC14.14□□□□□ -0.15
ACTA1P68133 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ACTA1P68133 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
ACTA1P68133 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
ACTA1P68133 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ACTA1P68133 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
ACTA1P68133 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC14.14□□□□□ -0.15
ACTA1P68133 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ACTA1P68133 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ACTA1P68133 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
ACTA1P68133 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC14.14□□□□□ -0.15
ACTA1P68133 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC14.14□□□□□ -0.15
ACTA1P68133 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC14.14□□□□□ -0.15
ACTA1P68133 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ACTA1P68133 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC14.14□□□□□ -0.15
ACTA1P68133 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
ACTA1P68133 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
ACTA1P68133 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC14.14□□□□□ -0.15
ACTA1P68133 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
ACTA1P68133 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ACTA1P68133 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ACTA1P68133 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
ACTA1P68133 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ACTA1P68133 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
ACTA1P68133 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
ACTA1P68133 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
ACTA1P68133 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ACTA1P68133 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ACTA1P68133 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
ACTA1P68133 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC14.13□□□□□ -0.15
ACTA1P68133 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC14.13□□□□□ -0.15
ACTA1P68133 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ACTA1P68133 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ACTA1P68133 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ACTA1P68133 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC14.13□□□□□ -0.15
ACTA1P68133 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
ACTA1P68133 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
ACTA1P68133 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
ACTA1P68133 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ACTA1P68133 AC009947.1-201ENST00000444350 727 ntBASIC14.13□□□□□ -0.15
ACTA1P68133 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC14.13□□□□□ -0.15
ACTA1P68133 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC14.13□□□□□ -0.15
ACTA1P68133 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC14.13□□□□□ -0.15
ACTA1P68133 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
ACTA1P68133 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC14.13□□□□□ -0.15
ACTA1P68133 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
ACTA1P68133 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
ACTA1P68133 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC14.13□□□□□ -0.15
ACTA1P68133 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms