Protein–RNA interactions for Protein: P61009

SPCS3, Signal peptidase complex subunit 3, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3P61009 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC12.97□□□□□ -0.33
SPCS3P61009 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
SPCS3P61009 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
SPCS3P61009 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SPCS3P61009 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC12.97□□□□□ -0.33
SPCS3P61009 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
SPCS3P61009 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
SPCS3P61009 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SPCS3P61009 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SPCS3P61009 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
SPCS3P61009 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
SPCS3P61009 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
SPCS3P61009 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC12.96□□□□□ -0.33
SPCS3P61009 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC12.96□□□□□ -0.33
SPCS3P61009 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC12.96□□□□□ -0.33
SPCS3P61009 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
SPCS3P61009 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
SPCS3P61009 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
SPCS3P61009 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
SPCS3P61009 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC12.96□□□□□ -0.33
SPCS3P61009 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
SPCS3P61009 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC12.96□□□□□ -0.33
SPCS3P61009 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
SPCS3P61009 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
SPCS3P61009 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
SPCS3P61009 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
SPCS3P61009 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
SPCS3P61009 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
SPCS3P61009 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC12.96□□□□□ -0.33
SPCS3P61009 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
SPCS3P61009 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
SPCS3P61009 AF186996.4-201ENST00000467186 377 ntBASIC12.96□□□□□ -0.33
SPCS3P61009 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC12.96□□□□□ -0.33
SPCS3P61009 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC12.96□□□□□ -0.33
SPCS3P61009 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC12.96□□□□□ -0.33
SPCS3P61009 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC12.96□□□□□ -0.33
SPCS3P61009 BMF-207ENST00000559701 630 ntTSL 3 BASIC12.96□□□□□ -0.33
SPCS3P61009 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
SPCS3P61009 MIR4751-201ENST00000578027 74 ntBASIC12.96□□□□□ -0.33
SPCS3P61009 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
SPCS3P61009 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC12.96□□□□□ -0.33
SPCS3P61009 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
SPCS3P61009 MIR4321-201ENST00000592276 80 ntBASIC12.96□□□□□ -0.33
SPCS3P61009 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC12.96□□□□□ -0.33
SPCS3P61009 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
SPCS3P61009 HADH-212ENST00000638621 741 ntTSL 5 BASIC12.96□□□□□ -0.33
SPCS3P61009 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
SPCS3P61009 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
SPCS3P61009 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
SPCS3P61009 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
SPCS3P61009 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
SPCS3P61009 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC12.96□□□□□ -0.33
SPCS3P61009 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC12.96□□□□□ -0.33
SPCS3P61009 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
SPCS3P61009 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC12.96□□□□□ -0.34
SPCS3P61009 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
SPCS3P61009 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
SPCS3P61009 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
SPCS3P61009 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC12.96□□□□□ -0.34
SPCS3P61009 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC12.96□□□□□ -0.34
SPCS3P61009 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
SPCS3P61009 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
SPCS3P61009 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
SPCS3P61009 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
SPCS3P61009 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC12.96□□□□□ -0.34
SPCS3P61009 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC12.95□□□□□ -0.34
SPCS3P61009 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
SPCS3P61009 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SPCS3P61009 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC12.95□□□□□ -0.34
SPCS3P61009 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
SPCS3P61009 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC12.95□□□□□ -0.34
SPCS3P61009 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SPCS3P61009 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
SPCS3P61009 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC12.95□□□□□ -0.34
SPCS3P61009 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
SPCS3P61009 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SPCS3P61009 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
SPCS3P61009 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
SPCS3P61009 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC12.95□□□□□ -0.34
SPCS3P61009 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SPCS3P61009 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC12.95□□□□□ -0.34
SPCS3P61009 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC12.95□□□□□ -0.34
SPCS3P61009 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC12.95□□□□□ -0.34
SPCS3P61009 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SPCS3P61009 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
SPCS3P61009 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC12.95□□□□□ -0.34
SPCS3P61009 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC12.95□□□□□ -0.34
SPCS3P61009 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC12.95□□□□□ -0.34
SPCS3P61009 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
SPCS3P61009 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
SPCS3P61009 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC12.95□□□□□ -0.34
SPCS3P61009 SDHD-206ENST00000528182 754 ntTSL 3 BASIC12.95□□□□□ -0.34
SPCS3P61009 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC12.95□□□□□ -0.34
SPCS3P61009 TOLLIP-AS1-201ENST00000530897 939 ntBASIC12.95□□□□□ -0.34
SPCS3P61009 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC12.95□□□□□ -0.34
SPCS3P61009 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC12.95□□□□□ -0.34
SPCS3P61009 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
SPCS3P61009 IFNL4P1-201ENST00000607083 540 ntBASIC12.95□□□□□ -0.34
SPCS3P61009 AL078644.1-201ENST00000609881 752 ntBASIC12.95□□□□□ -0.34
SPCS3P61009 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 73.5 ms