Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CLDN6P56747 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CLDN6P56747 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
CLDN6P56747 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC15.13■□□□□ 0.01
CLDN6P56747 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
CLDN6P56747 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CLDN6P56747 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CLDN6P56747 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CLDN6P56747 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CLDN6P56747 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
CLDN6P56747 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CLDN6P56747 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CLDN6P56747 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CLDN6P56747 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC15.13■□□□□ 0.01
CLDN6P56747 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC15.13■□□□□ 0.01
CLDN6P56747 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CLDN6P56747 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CLDN6P56747 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
CLDN6P56747 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
CLDN6P56747 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC15.13■□□□□ 0.01
CLDN6P56747 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC15.13■□□□□ 0.01
CLDN6P56747 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CLDN6P56747 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC15.13■□□□□ 0.01
CLDN6P56747 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC15.13■□□□□ 0.01
CLDN6P56747 AC006033.1-201ENST00000440505 426 ntBASIC15.13■□□□□ 0.01
CLDN6P56747 USP40-206ENST00000443711 628 ntTSL 2 BASIC15.13■□□□□ 0.01
CLDN6P56747 AC104306.2-201ENST00000451877 341 ntBASIC15.13■□□□□ 0.01
CLDN6P56747 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
CLDN6P56747 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CLDN6P56747 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC15.13■□□□□ 0.01
CLDN6P56747 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC15.13■□□□□ 0.01
CLDN6P56747 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC15.13■□□□□ 0.01
CLDN6P56747 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CLDN6P56747 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC15.13■□□□□ 0.01
CLDN6P56747 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC15.13■□□□□ 0.01
CLDN6P56747 AC009486.1-201ENST00000569860 813 ntBASIC15.13■□□□□ 0.01
CLDN6P56747 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC15.13■□□□□ 0.01
CLDN6P56747 MIR4741-201ENST00000579822 90 ntBASIC15.13■□□□□ 0.01
CLDN6P56747 GPX4-206ENST00000588919 803 ntTSL 2 BASIC15.13■□□□□ 0.01
CLDN6P56747 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
CLDN6P56747 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC15.13■□□□□ 0.01
CLDN6P56747 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
CLDN6P56747 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
CLDN6P56747 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC15.13■□□□□ 0.01
CLDN6P56747 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
CLDN6P56747 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC15.13■□□□□ 0.01
CLDN6P56747 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
CLDN6P56747 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC15.13■□□□□ 0.01
CLDN6P56747 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CLDN6P56747 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CLDN6P56747 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CLDN6P56747 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
CLDN6P56747 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CLDN6P56747 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
CLDN6P56747 AC134407.2-201ENST00000625089 1978 ntBASIC15.13■□□□□ 0.01
CLDN6P56747 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CLDN6P56747 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
CLDN6P56747 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
CLDN6P56747 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CLDN6P56747 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CLDN6P56747 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CLDN6P56747 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CLDN6P56747 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC15.12■□□□□ 0.01
CLDN6P56747 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
CLDN6P56747 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
CLDN6P56747 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CLDN6P56747 VILL-207ENST00000465644 1857 ntTSL 5 BASIC15.12■□□□□ 0.01
CLDN6P56747 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CLDN6P56747 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC15.12■□□□□ 0.01
CLDN6P56747 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
CLDN6P56747 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CLDN6P56747 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CLDN6P56747 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC15.12■□□□□ 0.01
CLDN6P56747 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC15.12■□□□□ 0.01
CLDN6P56747 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC15.12■□□□□ 0.01
CLDN6P56747 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CLDN6P56747 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC15.12■□□□□ 0.01
CLDN6P56747 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC15.12■□□□□ 0.01
CLDN6P56747 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
CLDN6P56747 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC15.12■□□□□ 0.01
CLDN6P56747 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC15.12■□□□□ 0.01
CLDN6P56747 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CLDN6P56747 ACTG1P17-201ENST00000558391 1119 ntBASIC15.12■□□□□ 0.01
CLDN6P56747 HNRNPA1P48-202ENST00000565308 961 ntBASIC15.12■□□□□ 0.01
CLDN6P56747 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC15.12■□□□□ 0.01
CLDN6P56747 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
CLDN6P56747 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC15.12■□□□□ 0.01
CLDN6P56747 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
CLDN6P56747 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CLDN6P56747 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CLDN6P56747 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CLDN6P56747 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC15.12■□□□□ 0.01
CLDN6P56747 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CLDN6P56747 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
CLDN6P56747 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
CLDN6P56747 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC15.12■□□□□ 0.01
CLDN6P56747 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CLDN6P56747 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CLDN6P56747 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
CLDN6P56747 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC15.12■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms