Protein–RNA interactions for Protein: P56704

WNT3A, Protein Wnt-3a, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3AP56704 AC010336.2-201ENST00000564226 506 ntBASIC15.97■□□□□ 0.15
WNT3AP56704 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC15.97■□□□□ 0.15
WNT3AP56704 AC025048.3-201ENST00000590609 569 ntBASIC15.97■□□□□ 0.15
WNT3AP56704 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
WNT3AP56704 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC15.97■□□□□ 0.15
WNT3AP56704 AC005702.4-201ENST00000618393 416 ntBASIC15.97■□□□□ 0.15
WNT3AP56704 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
WNT3AP56704 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC15.97■□□□□ 0.15
WNT3AP56704 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC15.97■□□□□ 0.15
WNT3AP56704 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
WNT3AP56704 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
WNT3AP56704 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
WNT3AP56704 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
WNT3AP56704 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
WNT3AP56704 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
WNT3AP56704 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
WNT3AP56704 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
WNT3AP56704 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC15.96■□□□□ 0.15
WNT3AP56704 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
WNT3AP56704 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
WNT3AP56704 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
WNT3AP56704 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
WNT3AP56704 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
WNT3AP56704 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
WNT3AP56704 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
WNT3AP56704 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
WNT3AP56704 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
WNT3AP56704 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC15.96■□□□□ 0.15
WNT3AP56704 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC15.96■□□□□ 0.15
WNT3AP56704 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
WNT3AP56704 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
WNT3AP56704 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
WNT3AP56704 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
WNT3AP56704 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
WNT3AP56704 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC15.96■□□□□ 0.15
WNT3AP56704 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
WNT3AP56704 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC15.96■□□□□ 0.15
WNT3AP56704 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
WNT3AP56704 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC15.96■□□□□ 0.15
WNT3AP56704 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
WNT3AP56704 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
WNT3AP56704 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
WNT3AP56704 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
WNT3AP56704 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC15.96■□□□□ 0.15
WNT3AP56704 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC15.96■□□□□ 0.15
WNT3AP56704 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC15.96■□□□□ 0.15
WNT3AP56704 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
WNT3AP56704 MPI-209ENST00000564003 1195 ntTSL 2 BASIC15.96■□□□□ 0.15
WNT3AP56704 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC15.96■□□□□ 0.15
WNT3AP56704 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC15.96■□□□□ 0.15
WNT3AP56704 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC15.96■□□□□ 0.15
WNT3AP56704 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
WNT3AP56704 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
WNT3AP56704 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
WNT3AP56704 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC15.96■□□□□ 0.15
WNT3AP56704 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC15.96■□□□□ 0.15
WNT3AP56704 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
WNT3AP56704 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
WNT3AP56704 Z97205.2-201ENST00000564697 1639 ntBASIC15.96■□□□□ 0.15
WNT3AP56704 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
WNT3AP56704 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
WNT3AP56704 AC126177.1-201ENST00000547829 2218 ntBASIC15.96■□□□□ 0.15
WNT3AP56704 AC013268.4-201ENST00000637413 2228 ntBASIC15.96■□□□□ 0.15
WNT3AP56704 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
WNT3AP56704 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
WNT3AP56704 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
WNT3AP56704 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
WNT3AP56704 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC15.96■□□□□ 0.15
WNT3AP56704 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC15.96■□□□□ 0.14
WNT3AP56704 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
WNT3AP56704 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
WNT3AP56704 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
WNT3AP56704 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
WNT3AP56704 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
WNT3AP56704 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.14
WNT3AP56704 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC15.95■□□□□ 0.14
WNT3AP56704 API5-202ENST00000420461 2009 ntTSL 2 BASIC15.95■□□□□ 0.14
WNT3AP56704 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
WNT3AP56704 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC15.95■□□□□ 0.14
WNT3AP56704 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
WNT3AP56704 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
WNT3AP56704 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
WNT3AP56704 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
WNT3AP56704 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC15.95■□□□□ 0.14
WNT3AP56704 BID-213ENST00000615414 2236 ntTSL 5 BASIC15.95■□□□□ 0.14
WNT3AP56704 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
WNT3AP56704 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
WNT3AP56704 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC15.95■□□□□ 0.14
WNT3AP56704 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
WNT3AP56704 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
WNT3AP56704 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC15.95■□□□□ 0.14
WNT3AP56704 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
WNT3AP56704 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
WNT3AP56704 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
WNT3AP56704 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
WNT3AP56704 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC15.95■□□□□ 0.14
WNT3AP56704 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC15.95■□□□□ 0.14
WNT3AP56704 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC15.95■□□□□ 0.14
WNT3AP56704 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
WNT3AP56704 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms