Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC17.39■□□□□ 0.37
PMS1P54277 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC17.39■□□□□ 0.37
PMS1P54277 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
PMS1P54277 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PMS1P54277 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
PMS1P54277 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC17.39■□□□□ 0.37
PMS1P54277 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PMS1P54277 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.37
PMS1P54277 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
PMS1P54277 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC17.39■□□□□ 0.37
PMS1P54277 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PMS1P54277 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PMS1P54277 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PMS1P54277 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PMS1P54277 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC17.39■□□□□ 0.37
PMS1P54277 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC17.39■□□□□ 0.37
PMS1P54277 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
PMS1P54277 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PMS1P54277 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
PMS1P54277 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC17.38■□□□□ 0.37
PMS1P54277 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
PMS1P54277 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PMS1P54277 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
PMS1P54277 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
PMS1P54277 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PMS1P54277 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PMS1P54277 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
PMS1P54277 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PMS1P54277 RPL30-202ENST00000396070 440 ntTSL 2 BASIC17.38■□□□□ 0.37
PMS1P54277 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC17.38■□□□□ 0.37
PMS1P54277 AC074338.1-201ENST00000416825 156 ntBASIC17.38■□□□□ 0.37
PMS1P54277 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PMS1P54277 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PMS1P54277 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PMS1P54277 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC17.38■□□□□ 0.37
PMS1P54277 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
PMS1P54277 AC092865.5-201ENST00000545435 363 ntBASIC17.38■□□□□ 0.37
PMS1P54277 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC17.38■□□□□ 0.37
PMS1P54277 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC17.38■□□□□ 0.37
PMS1P54277 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC17.38■□□□□ 0.37
PMS1P54277 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PMS1P54277 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
PMS1P54277 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC17.38■□□□□ 0.37
PMS1P54277 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PMS1P54277 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
PMS1P54277 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PMS1P54277 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PMS1P54277 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PMS1P54277 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC17.38■□□□□ 0.37
PMS1P54277 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
PMS1P54277 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
PMS1P54277 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PMS1P54277 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
PMS1P54277 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
PMS1P54277 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC17.38■□□□□ 0.37
PMS1P54277 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC17.37■□□□□ 0.37
PMS1P54277 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
PMS1P54277 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC17.37■□□□□ 0.37
PMS1P54277 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PMS1P54277 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
PMS1P54277 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC17.37■□□□□ 0.37
PMS1P54277 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
PMS1P54277 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PMS1P54277 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PMS1P54277 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC17.37■□□□□ 0.37
PMS1P54277 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
PMS1P54277 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PMS1P54277 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PMS1P54277 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PMS1P54277 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
PMS1P54277 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PMS1P54277 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PMS1P54277 MTND6P24-201ENST00000440466 518 ntBASIC17.37■□□□□ 0.37
PMS1P54277 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PMS1P54277 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC17.37■□□□□ 0.37
PMS1P54277 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PMS1P54277 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC17.37■□□□□ 0.37
PMS1P54277 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PMS1P54277 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
PMS1P54277 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC17.37■□□□□ 0.37
PMS1P54277 MIR6080-201ENST00000617359 66 ntBASIC17.37■□□□□ 0.37
PMS1P54277 AP001059.3-201ENST00000619053 235 ntBASIC17.37■□□□□ 0.37
PMS1P54277 AC134684.3-201ENST00000641758 218 ntBASIC17.37■□□□□ 0.37
PMS1P54277 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PMS1P54277 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PMS1P54277 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PMS1P54277 KRT8P12-202ENST00000472924 1397 ntBASIC17.37■□□□□ 0.37
PMS1P54277 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC17.37■□□□□ 0.37
PMS1P54277 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PMS1P54277 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
PMS1P54277 PARN-202ENST00000420015 2360 ntTSL 2 BASIC17.37■□□□□ 0.37
PMS1P54277 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC17.37■□□□□ 0.37
PMS1P54277 AC023024.2-201ENST00000623561 1993 ntBASIC17.37■□□□□ 0.37
PMS1P54277 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
PMS1P54277 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC17.37■□□□□ 0.37
PMS1P54277 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PMS1P54277 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PMS1P54277 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PMS1P54277 LINC00528-201ENST00000600723 2160 ntBASIC17.36■□□□□ 0.37
PMS1P54277 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms