Protein–RNA interactions for Protein: P53708

ITGA8, Integrin alpha-8, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA8P53708 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
ITGA8P53708 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ITGA8P53708 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
ITGA8P53708 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
ITGA8P53708 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
ITGA8P53708 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
ITGA8P53708 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
ITGA8P53708 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC16.27■□□□□ 0.2
ITGA8P53708 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ITGA8P53708 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
ITGA8P53708 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
ITGA8P53708 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
ITGA8P53708 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
ITGA8P53708 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
ITGA8P53708 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ITGA8P53708 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
ITGA8P53708 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC16.27■□□□□ 0.2
ITGA8P53708 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ITGA8P53708 NME2-201ENST00000393183 568 ntTSL 2 BASIC16.27■□□□□ 0.2
ITGA8P53708 AC002056.1-201ENST00000395613 760 ntBASIC16.27■□□□□ 0.2
ITGA8P53708 RPS8P6-201ENST00000426177 609 ntBASIC16.27■□□□□ 0.2
ITGA8P53708 AP000347.1-202ENST00000435868 847 ntBASIC16.27■□□□□ 0.2
ITGA8P53708 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC16.27■□□□□ 0.2
ITGA8P53708 AC074386.1-202ENST00000463561 864 ntBASIC16.27■□□□□ 0.2
ITGA8P53708 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC16.27■□□□□ 0.2
ITGA8P53708 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC16.27■□□□□ 0.2
ITGA8P53708 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC16.27■□□□□ 0.2
ITGA8P53708 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
ITGA8P53708 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
ITGA8P53708 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
ITGA8P53708 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC16.27■□□□□ 0.2
ITGA8P53708 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ITGA8P53708 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC16.27■□□□□ 0.2
ITGA8P53708 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ITGA8P53708 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
ITGA8P53708 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC16.27■□□□□ 0.19
ITGA8P53708 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC16.27■□□□□ 0.19
ITGA8P53708 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
ITGA8P53708 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
ITGA8P53708 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
ITGA8P53708 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
ITGA8P53708 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
ITGA8P53708 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
ITGA8P53708 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC16.27■□□□□ 0.19
ITGA8P53708 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
ITGA8P53708 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC16.27■□□□□ 0.19
ITGA8P53708 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
ITGA8P53708 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC16.26■□□□□ 0.19
ITGA8P53708 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
ITGA8P53708 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ITGA8P53708 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
ITGA8P53708 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
ITGA8P53708 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC16.26■□□□□ 0.19
ITGA8P53708 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC16.26■□□□□ 0.19
ITGA8P53708 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
ITGA8P53708 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC16.26■□□□□ 0.19
ITGA8P53708 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
ITGA8P53708 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC16.26■□□□□ 0.19
ITGA8P53708 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
ITGA8P53708 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ITGA8P53708 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ITGA8P53708 AL022342.1-201ENST00000400363 863 ntBASIC16.26■□□□□ 0.19
ITGA8P53708 AC007967.2-201ENST00000432613 625 ntBASIC16.26■□□□□ 0.19
ITGA8P53708 AC034105.1-201ENST00000563488 319 ntBASIC16.26■□□□□ 0.19
ITGA8P53708 RARRES2P8-201ENST00000566335 367 ntBASIC16.26■□□□□ 0.19
ITGA8P53708 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC16.26■□□□□ 0.19
ITGA8P53708 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC16.26■□□□□ 0.19
ITGA8P53708 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
ITGA8P53708 AC120114.3-201ENST00000611923 658 ntBASIC16.26■□□□□ 0.19
ITGA8P53708 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC16.26■□□□□ 0.19
ITGA8P53708 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC16.26■□□□□ 0.19
ITGA8P53708 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC16.26■□□□□ 0.19
ITGA8P53708 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ITGA8P53708 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ITGA8P53708 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
ITGA8P53708 STRN-202ENST00000379213 2254 ntTSL 5 BASIC16.26■□□□□ 0.19
ITGA8P53708 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC16.26■□□□□ 0.19
ITGA8P53708 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
ITGA8P53708 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
ITGA8P53708 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC16.26■□□□□ 0.19
ITGA8P53708 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC16.26■□□□□ 0.19
ITGA8P53708 AC104109.2-201ENST00000602919 1418 ntBASIC16.26■□□□□ 0.19
ITGA8P53708 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC16.26■□□□□ 0.19
ITGA8P53708 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC16.26■□□□□ 0.19
ITGA8P53708 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ITGA8P53708 GOLGA8DP-202ENST00000341390 2184 ntBASIC16.26■□□□□ 0.19
ITGA8P53708 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ITGA8P53708 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC16.25■□□□□ 0.19
ITGA8P53708 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
ITGA8P53708 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC16.25■□□□□ 0.19
ITGA8P53708 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
ITGA8P53708 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ITGA8P53708 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
ITGA8P53708 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC16.25■□□□□ 0.19
ITGA8P53708 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ITGA8P53708 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ITGA8P53708 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
ITGA8P53708 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
ITGA8P53708 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ITGA8P53708 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms