Protein–RNA interactions for Protein: P52799

EFNB2, Ephrin-B2, humanhuman

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB2P52799 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
EFNB2P52799 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
EFNB2P52799 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC13.73□□□□□ -0.21
EFNB2P52799 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC13.73□□□□□ -0.21
EFNB2P52799 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
EFNB2P52799 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
EFNB2P52799 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
EFNB2P52799 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
EFNB2P52799 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
EFNB2P52799 AC073439.1-201ENST00000624121 1774 ntBASIC13.73□□□□□ -0.21
EFNB2P52799 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC13.73□□□□□ -0.21
EFNB2P52799 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
EFNB2P52799 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
EFNB2P52799 AL390755.1-201ENST00000623716 2027 ntBASIC13.73□□□□□ -0.21
EFNB2P52799 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
EFNB2P52799 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
EFNB2P52799 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
EFNB2P52799 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
EFNB2P52799 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
EFNB2P52799 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC13.72□□□□□ -0.21
EFNB2P52799 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
EFNB2P52799 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
EFNB2P52799 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
EFNB2P52799 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
EFNB2P52799 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
EFNB2P52799 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
EFNB2P52799 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC13.72□□□□□ -0.21
EFNB2P52799 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC13.72□□□□□ -0.21
EFNB2P52799 USP28-214ENST00000545540 3431 ntTSL 2 BASIC13.72□□□□□ -0.21
EFNB2P52799 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
EFNB2P52799 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC13.72□□□□□ -0.21
EFNB2P52799 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC13.72□□□□□ -0.21
EFNB2P52799 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
EFNB2P52799 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
EFNB2P52799 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
EFNB2P52799 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
EFNB2P52799 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
EFNB2P52799 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
EFNB2P52799 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC13.72□□□□□ -0.21
EFNB2P52799 HNRNPA1P28-201ENST00000424481 961 ntBASIC13.72□□□□□ -0.21
EFNB2P52799 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
EFNB2P52799 FIS1-203ENST00000442303 631 ntTSL 3 BASIC13.72□□□□□ -0.21
EFNB2P52799 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC13.72□□□□□ -0.21
EFNB2P52799 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC13.72□□□□□ -0.21
EFNB2P52799 CFL1-202ENST00000524553 860 ntTSL 2 BASIC13.72□□□□□ -0.21
EFNB2P52799 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC13.72□□□□□ -0.21
EFNB2P52799 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC13.72□□□□□ -0.21
EFNB2P52799 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
EFNB2P52799 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC13.72□□□□□ -0.21
EFNB2P52799 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC13.72□□□□□ -0.21
EFNB2P52799 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC13.72□□□□□ -0.21
EFNB2P52799 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
EFNB2P52799 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC13.72□□□□□ -0.21
EFNB2P52799 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
EFNB2P52799 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
EFNB2P52799 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
EFNB2P52799 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
EFNB2P52799 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
EFNB2P52799 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC13.72□□□□□ -0.21
EFNB2P52799 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
EFNB2P52799 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC13.72□□□□□ -0.21
EFNB2P52799 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
EFNB2P52799 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
EFNB2P52799 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
EFNB2P52799 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
EFNB2P52799 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
EFNB2P52799 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC13.72□□□□□ -0.21
EFNB2P52799 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
EFNB2P52799 WASH6P-202ENST00000359512 1437 ntBASIC13.72□□□□□ -0.21
EFNB2P52799 FLII-221ENST00000578558 2377 ntTSL 5 BASIC13.72□□□□□ -0.21
EFNB2P52799 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
EFNB2P52799 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
EFNB2P52799 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
EFNB2P52799 AC127383.1-201ENST00000444697 1800 ntBASIC13.71□□□□□ -0.21
EFNB2P52799 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
EFNB2P52799 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
EFNB2P52799 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC13.71□□□□□ -0.21
EFNB2P52799 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
EFNB2P52799 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
EFNB2P52799 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC13.71□□□□□ -0.21
EFNB2P52799 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
EFNB2P52799 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
EFNB2P52799 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
EFNB2P52799 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
EFNB2P52799 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
EFNB2P52799 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC13.71□□□□□ -0.21
EFNB2P52799 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
EFNB2P52799 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
EFNB2P52799 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
EFNB2P52799 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC13.71□□□□□ -0.21
EFNB2P52799 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
EFNB2P52799 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
EFNB2P52799 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC13.71□□□□□ -0.21
EFNB2P52799 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
EFNB2P52799 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
EFNB2P52799 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
EFNB2P52799 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
EFNB2P52799 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC13.71□□□□□ -0.21
EFNB2P52799 CRYGEP-201ENST00000412192 528 ntBASIC13.71□□□□□ -0.21
EFNB2P52799 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC13.71□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 55.5 ms