Protein–RNA interactions for Protein: P45973

CBX5, Chromobox protein homolog 5, humanhuman

Predictions only

Length 191 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5P45973 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
CBX5P45973 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
CBX5P45973 FEM1A-201ENST00000269856 9593 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
CBX5P45973 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CBX5P45973 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CBX5P45973 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC13.72□□□□□ -0.21
CBX5P45973 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
CBX5P45973 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC13.72□□□□□ -0.21
CBX5P45973 AL356275.1-201ENST00000638446 7440 ntTSL 5 BASIC13.72□□□□□ -0.21
CBX5P45973 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC13.72□□□□□ -0.21
CBX5P45973 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CBX5P45973 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC13.72□□□□□ -0.21
CBX5P45973 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CBX5P45973 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CBX5P45973 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CBX5P45973 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CBX5P45973 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CBX5P45973 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CBX5P45973 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
CBX5P45973 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CBX5P45973 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC13.72□□□□□ -0.21
CBX5P45973 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CBX5P45973 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC13.72□□□□□ -0.21
CBX5P45973 MIR193BHG-211ENST00000641433 5365 ntBASIC13.72□□□□□ -0.21
CBX5P45973 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CBX5P45973 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
CBX5P45973 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
CBX5P45973 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CBX5P45973 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
CBX5P45973 PAN3-AS1-201ENST00000563843 1351 ntBASIC13.71□□□□□ -0.21
CBX5P45973 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CBX5P45973 ADPRHL1-204ENST00000612156 9759 ntTSL 5 BASIC13.71□□□□□ -0.21
CBX5P45973 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CBX5P45973 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CBX5P45973 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC13.71□□□□□ -0.21
CBX5P45973 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
CBX5P45973 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC13.71□□□□□ -0.21
CBX5P45973 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CBX5P45973 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CBX5P45973 IGF2BP1-201ENST00000290341 8274 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CBX5P45973 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CBX5P45973 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CBX5P45973 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CBX5P45973 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
CBX5P45973 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
CBX5P45973 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC13.71□□□□□ -0.21
CBX5P45973 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC13.71□□□□□ -0.21
CBX5P45973 ELK2BP-201ENST00000415014 1224 ntBASIC13.71□□□□□ -0.21
CBX5P45973 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
CBX5P45973 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CBX5P45973 SCARNA2-201ENST00000458748 420 ntBASIC13.71□□□□□ -0.21
CBX5P45973 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC13.71□□□□□ -0.21
CBX5P45973 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC13.71□□□□□ -0.21
CBX5P45973 MIR3909-201ENST00000579518 119 ntBASIC13.71□□□□□ -0.21
CBX5P45973 AC138894.3-201ENST00000603787 634 ntBASIC13.71□□□□□ -0.21
CBX5P45973 AC091076.1-201ENST00000610741 619 ntBASIC13.71□□□□□ -0.21
CBX5P45973 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC13.71□□□□□ -0.21
CBX5P45973 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CBX5P45973 AL355877.3-201ENST00000622820 899 ntBASIC13.71□□□□□ -0.21
CBX5P45973 GABPB1-201ENST00000220429 2726 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CBX5P45973 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC13.71□□□□□ -0.21
CBX5P45973 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CBX5P45973 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
CBX5P45973 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC13.71□□□□□ -0.21
CBX5P45973 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
CBX5P45973 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
CBX5P45973 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC13.71□□□□□ -0.22
CBX5P45973 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
CBX5P45973 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
CBX5P45973 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
CBX5P45973 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC13.71□□□□□ -0.22
CBX5P45973 MYO16-202ENST00000356711 6874 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
CBX5P45973 NHLH2-202ENST00000369506 7226 ntAPPRIS P1 BASIC13.71□□□□□ -0.22
CBX5P45973 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
CBX5P45973 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.22
CBX5P45973 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC13.71□□□□□ -0.22
CBX5P45973 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
CBX5P45973 NHSL1-202ENST00000343505 6535 ntAPPRIS P3 TSL 5 BASIC13.71□□□□□ -0.22
CBX5P45973 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC13.71□□□□□ -0.22
CBX5P45973 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC13.71□□□□□ -0.22
CBX5P45973 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.22
CBX5P45973 AC006504.4-201ENST00000592118 1568 ntBASIC13.71□□□□□ -0.22
CBX5P45973 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC13.7□□□□□ -0.22
CBX5P45973 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC13.7□□□□□ -0.22
CBX5P45973 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CBX5P45973 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CBX5P45973 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
CBX5P45973 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CBX5P45973 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC13.7□□□□□ -0.22
CBX5P45973 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC13.7□□□□□ -0.22
CBX5P45973 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
CBX5P45973 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CBX5P45973 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC13.7□□□□□ -0.22
CBX5P45973 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CBX5P45973 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CBX5P45973 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC13.7□□□□□ -0.22
CBX5P45973 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CBX5P45973 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CBX5P45973 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CBX5P45973 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms