Protein–RNA interactions for Protein: P29965

CD40LG, CD40 ligand, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40LGP29965 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CD40LGP29965 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CD40LGP29965 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CD40LGP29965 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CD40LGP29965 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC14.09□□□□□ -0.15
CD40LGP29965 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
CD40LGP29965 USP31-203ENST00000567975 2142 ntTSL 2 BASIC14.09□□□□□ -0.15
CD40LGP29965 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
CD40LGP29965 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CD40LGP29965 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CD40LGP29965 INTS4P1-203ENST00000641008 3683 ntBASIC14.09□□□□□ -0.15
CD40LGP29965 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
CD40LGP29965 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CD40LGP29965 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
CD40LGP29965 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CD40LGP29965 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CD40LGP29965 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CD40LGP29965 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC14.09□□□□□ -0.15
CD40LGP29965 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC14.09□□□□□ -0.15
CD40LGP29965 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC14.09□□□□□ -0.15
CD40LGP29965 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CD40LGP29965 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
CD40LGP29965 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CD40LGP29965 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
CD40LGP29965 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC14.09□□□□□ -0.15
CD40LGP29965 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CD40LGP29965 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
CD40LGP29965 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CD40LGP29965 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC14.09□□□□□ -0.15
CD40LGP29965 CHCHD2P8-201ENST00000429873 447 ntBASIC14.09□□□□□ -0.15
CD40LGP29965 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
CD40LGP29965 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CD40LGP29965 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC14.09□□□□□ -0.15
CD40LGP29965 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC14.09□□□□□ -0.15
CD40LGP29965 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
CD40LGP29965 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC14.09□□□□□ -0.15
CD40LGP29965 AC116407.4-201ENST00000623319 1061 ntBASIC14.09□□□□□ -0.15
CD40LGP29965 AL358472.4-201ENST00000633140 710 ntBASIC14.09□□□□□ -0.15
CD40LGP29965 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC14.09□□□□□ -0.15
CD40LGP29965 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC14.09□□□□□ -0.15
CD40LGP29965 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CD40LGP29965 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CD40LGP29965 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
CD40LGP29965 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
CD40LGP29965 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
CD40LGP29965 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
CD40LGP29965 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CD40LGP29965 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
CD40LGP29965 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
CD40LGP29965 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC14.09□□□□□ -0.15
CD40LGP29965 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CD40LGP29965 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
CD40LGP29965 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC14.09□□□□□ -0.15
CD40LGP29965 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC14.09□□□□□ -0.15
CD40LGP29965 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
CD40LGP29965 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC14.09□□□□□ -0.15
CD40LGP29965 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
CD40LGP29965 AC067750.1-201ENST00000608826 6545 ntBASIC14.09□□□□□ -0.15
CD40LGP29965 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CD40LGP29965 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
CD40LGP29965 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CD40LGP29965 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CD40LGP29965 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CD40LGP29965 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
CD40LGP29965 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
CD40LGP29965 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
CD40LGP29965 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CD40LGP29965 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
CD40LGP29965 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC14.08□□□□□ -0.16
CD40LGP29965 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC14.08□□□□□ -0.16
CD40LGP29965 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CD40LGP29965 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CD40LGP29965 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CD40LGP29965 FXN-203ENST00000396366 922 ntTSL 2 BASIC14.08□□□□□ -0.16
CD40LGP29965 NKTR-203ENST00000442970 646 ntTSL 2 BASIC14.08□□□□□ -0.16
CD40LGP29965 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CD40LGP29965 TSSC2-201ENST00000450217 709 ntBASIC14.08□□□□□ -0.16
CD40LGP29965 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC14.08□□□□□ -0.16
CD40LGP29965 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CD40LGP29965 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC14.08□□□□□ -0.16
CD40LGP29965 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC14.08□□□□□ -0.16
CD40LGP29965 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC14.08□□□□□ -0.16
CD40LGP29965 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC14.08□□□□□ -0.16
CD40LGP29965 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
CD40LGP29965 AC124864.1-201ENST00000623408 392 ntBASIC14.08□□□□□ -0.16
CD40LGP29965 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC14.08□□□□□ -0.16
CD40LGP29965 AC023024.2-201ENST00000623561 1993 ntBASIC14.08□□□□□ -0.16
CD40LGP29965 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
CD40LGP29965 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
CD40LGP29965 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CD40LGP29965 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CD40LGP29965 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CD40LGP29965 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CD40LGP29965 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CD40LGP29965 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CD40LGP29965 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC14.08□□□□□ -0.16
CD40LGP29965 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
CD40LGP29965 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC14.08□□□□□ -0.16
CD40LGP29965 SLC6A6P1-201ENST00000413933 1850 ntBASIC14.08□□□□□ -0.16
CD40LGP29965 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms