Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
PTPN6P29350 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PTPN6P29350 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC15.04■□□□□ -0
PTPN6P29350 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
PTPN6P29350 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC15.04■□□□□ -0
PTPN6P29350 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC15.04■□□□□ -0
PTPN6P29350 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PTPN6P29350 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC15.03■□□□□ -0
PTPN6P29350 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC15.03■□□□□ -0
PTPN6P29350 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC15.03■□□□□ -0
PTPN6P29350 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC15.03■□□□□ -0
PTPN6P29350 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
PTPN6P29350 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PTPN6P29350 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PTPN6P29350 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC15.03■□□□□ -0
PTPN6P29350 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
PTPN6P29350 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
PTPN6P29350 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC15.03■□□□□ -0
PTPN6P29350 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC15.03■□□□□ -0
PTPN6P29350 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PTPN6P29350 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
PTPN6P29350 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC15.03■□□□□ -0
PTPN6P29350 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
PTPN6P29350 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PTPN6P29350 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC15.03■□□□□ -0
PTPN6P29350 AL139400.1-201ENST00000366220 510 ntBASIC15.03■□□□□ -0
PTPN6P29350 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC15.03■□□□□ -0
PTPN6P29350 PTMS-202ENST00000389462 773 ntTSL 2 BASIC15.03■□□□□ -0
PTPN6P29350 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC15.03■□□□□ -0
PTPN6P29350 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC15.03■□□□□ -0
PTPN6P29350 KRT18P32-201ENST00000424695 1287 ntBASIC15.03■□□□□ -0
PTPN6P29350 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC15.03■□□□□ -0
PTPN6P29350 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC15.03■□□□□ -0
PTPN6P29350 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC15.03■□□□□ -0
PTPN6P29350 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PTPN6P29350 SSH2-211ENST00000590153 570 ntTSL 4 BASIC15.03■□□□□ -0
PTPN6P29350 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC15.03■□□□□ -0
PTPN6P29350 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC15.03■□□□□ -0
PTPN6P29350 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC15.03■□□□□ -0
PTPN6P29350 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC15.03■□□□□ -0
PTPN6P29350 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PTPN6P29350 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC15.03■□□□□ -0
PTPN6P29350 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
PTPN6P29350 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC15.03■□□□□ -0
PTPN6P29350 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PTPN6P29350 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PTPN6P29350 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
PTPN6P29350 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC15.03■□□□□ -0
PTPN6P29350 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC15.03■□□□□ -0
PTPN6P29350 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
PTPN6P29350 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PTPN6P29350 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC15.03■□□□□ -0
PTPN6P29350 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC15.03■□□□□ -0
PTPN6P29350 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC15.03■□□□□ -0
PTPN6P29350 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
PTPN6P29350 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PTPN6P29350 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PTPN6P29350 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PTPN6P29350 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
PTPN6P29350 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC15.02■□□□□ -0
PTPN6P29350 UXT-AS1-201ENST00000590504 1525 ntBASIC15.02■□□□□ -0
PTPN6P29350 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC15.02■□□□□ -0
PTPN6P29350 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
PTPN6P29350 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC15.02■□□□□ -0
PTPN6P29350 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC15.02■□□□□ -0
PTPN6P29350 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC15.02■□□□□ -0
PTPN6P29350 POR-201ENST00000394893 2532 ntTSL 5 BASIC15.02■□□□□ -0
PTPN6P29350 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
PTPN6P29350 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC15.02■□□□□ -0
PTPN6P29350 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC15.02■□□□□ -0
PTPN6P29350 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC15.02■□□□□ -0
PTPN6P29350 GSN-215ENST00000545652 2428 ntTSL 2 BASIC15.02■□□□□ -0
PTPN6P29350 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
PTPN6P29350 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
PTPN6P29350 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
PTPN6P29350 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC15.02■□□□□ -0
PTPN6P29350 MIR346-201ENST00000362234 95 ntBASIC15.02■□□□□ -0
PTPN6P29350 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
PTPN6P29350 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC15.02■□□□□ -0
PTPN6P29350 FAM220BP-201ENST00000377689 816 ntBASIC15.02■□□□□ -0
PTPN6P29350 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC15.02■□□□□ -0
PTPN6P29350 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC15.02■□□□□ -0
PTPN6P29350 FAM58DP-201ENST00000428076 619 ntBASIC15.02■□□□□ -0
PTPN6P29350 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC15.02■□□□□ -0
PTPN6P29350 HLA-J-203ENST00000494367 1087 ntBASIC15.02■□□□□ -0
PTPN6P29350 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02■□□□□ -0
PTPN6P29350 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC15.02■□□□□ -0
PTPN6P29350 AP000842.3-202ENST00000569238 1080 ntBASIC15.02■□□□□ -0
PTPN6P29350 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC15.02■□□□□ -0
PTPN6P29350 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
PTPN6P29350 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
PTPN6P29350 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC15.02□□□□□ -0.01
PTPN6P29350 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC15.02□□□□□ -0.01
PTPN6P29350 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC15.02□□□□□ -0.01
PTPN6P29350 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
PTPN6P29350 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
PTPN6P29350 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC15.02□□□□□ -0.01
PTPN6P29350 FAM45BP-202ENST00000592932 1624 ntBASIC15.02□□□□□ -0.01
PTPN6P29350 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
PTPN6P29350 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms