Protein–RNA interactions for Protein: P21912

SDHB, Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial, humanhuman

Predictions only

Length 280 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHBP21912 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC15.49■□□□□ 0.07
SDHBP21912 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SDHBP21912 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC15.49■□□□□ 0.07
SDHBP21912 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC15.49■□□□□ 0.07
SDHBP21912 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
SDHBP21912 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SDHBP21912 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SDHBP21912 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC15.49■□□□□ 0.07
SDHBP21912 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC15.49■□□□□ 0.07
SDHBP21912 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
SDHBP21912 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
SDHBP21912 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
SDHBP21912 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
SDHBP21912 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
SDHBP21912 PON3-201ENST00000265627 1105 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SDHBP21912 TCL1B-201ENST00000340722 1166 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SDHBP21912 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SDHBP21912 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
SDHBP21912 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC15.49■□□□□ 0.07
SDHBP21912 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
SDHBP21912 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC15.49■□□□□ 0.07
SDHBP21912 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC15.49■□□□□ 0.07
SDHBP21912 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC15.49■□□□□ 0.07
SDHBP21912 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
SDHBP21912 PGAM1P5-201ENST00000548011 764 ntBASIC15.49■□□□□ 0.07
SDHBP21912 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC15.49■□□□□ 0.07
SDHBP21912 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC15.49■□□□□ 0.07
SDHBP21912 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
SDHBP21912 SPIB-207ENST00000597855 564 ntTSL 4 BASIC15.49■□□□□ 0.07
SDHBP21912 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC15.49■□□□□ 0.07
SDHBP21912 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC15.49■□□□□ 0.07
SDHBP21912 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SDHBP21912 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
SDHBP21912 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
SDHBP21912 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC15.49■□□□□ 0.07
SDHBP21912 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC15.49■□□□□ 0.07
SDHBP21912 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
SDHBP21912 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
SDHBP21912 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
SDHBP21912 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
SDHBP21912 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC15.49■□□□□ 0.07
SDHBP21912 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC15.48■□□□□ 0.07
SDHBP21912 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
SDHBP21912 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC15.48■□□□□ 0.07
SDHBP21912 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SDHBP21912 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SDHBP21912 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
SDHBP21912 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
SDHBP21912 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
SDHBP21912 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
SDHBP21912 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SDHBP21912 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SDHBP21912 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
SDHBP21912 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC15.48■□□□□ 0.07
SDHBP21912 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
SDHBP21912 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
SDHBP21912 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
SDHBP21912 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SDHBP21912 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SDHBP21912 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
SDHBP21912 SNX21-203ENST00000372541 771 ntTSL 2 BASIC15.48■□□□□ 0.07
SDHBP21912 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
SDHBP21912 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC15.48■□□□□ 0.07
SDHBP21912 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
SDHBP21912 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC15.48■□□□□ 0.07
SDHBP21912 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC15.48■□□□□ 0.07
SDHBP21912 FANCA-205ENST00000543736 1000 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
SDHBP21912 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC15.48■□□□□ 0.07
SDHBP21912 PAM16-215ENST00000577031 548 ntTSL 4 BASIC15.48■□□□□ 0.07
SDHBP21912 NKG7-204ENST00000595217 816 ntTSL 2 BASIC15.48■□□□□ 0.07
SDHBP21912 AC097724.1-201ENST00000609581 426 ntBASIC15.48■□□□□ 0.07
SDHBP21912 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC15.48■□□□□ 0.07
SDHBP21912 AC138649.2-201ENST00000615886 705 ntBASIC15.48■□□□□ 0.07
SDHBP21912 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC15.48■□□□□ 0.07
SDHBP21912 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC15.48■□□□□ 0.07
SDHBP21912 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
SDHBP21912 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SDHBP21912 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC15.48■□□□□ 0.07
SDHBP21912 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SDHBP21912 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
SDHBP21912 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC15.48■□□□□ 0.07
SDHBP21912 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
SDHBP21912 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SDHBP21912 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SDHBP21912 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
SDHBP21912 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
SDHBP21912 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SDHBP21912 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SDHBP21912 LINC00304-203ENST00000565008 1864 ntBASIC15.48■□□□□ 0.07
SDHBP21912 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
SDHBP21912 DOC2GP-204ENST00000639052 2548 ntBASIC15.48■□□□□ 0.07
SDHBP21912 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
SDHBP21912 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
SDHBP21912 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC15.48■□□□□ 0.07
SDHBP21912 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
SDHBP21912 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC15.47■□□□□ 0.07
SDHBP21912 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
SDHBP21912 TUBB8P12-201ENST00000308911 1335 ntBASIC15.47■□□□□ 0.07
SDHBP21912 TUBB7P-202ENST00000428444 1305 ntBASIC15.47■□□□□ 0.07
SDHBP21912 TUBB8P7-204ENST00000567960 1332 ntBASIC15.47■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 59.1 ms