Protein–RNA interactions for Protein: P18031

PTPN1, Tyrosine-protein phosphatase non-receptor type 1, humanhuman

Known RBP Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1P18031 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PTPN1P18031 PKIG-203ENST00000372887 769 ntTSL 3 BASIC16.71■□□□□ 0.27
PTPN1P18031 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
PTPN1P18031 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PTPN1P18031 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC16.71■□□□□ 0.27
PTPN1P18031 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC16.71■□□□□ 0.27
PTPN1P18031 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
PTPN1P18031 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC16.71■□□□□ 0.27
PTPN1P18031 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC16.71■□□□□ 0.27
PTPN1P18031 RRP7BP-205ENST00000566851 833 ntBASIC16.71■□□□□ 0.27
PTPN1P18031 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC16.71■□□□□ 0.27
PTPN1P18031 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC16.71■□□□□ 0.27
PTPN1P18031 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PTPN1P18031 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
PTPN1P18031 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PTPN1P18031 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
PTPN1P18031 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PTPN1P18031 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PTPN1P18031 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PTPN1P18031 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PTPN1P18031 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.26
PTPN1P18031 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
PTPN1P18031 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
PTPN1P18031 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC16.7■□□□□ 0.26
PTPN1P18031 AMT-233ENST00000636522 1620 ntTSL 2 BASIC16.7■□□□□ 0.26
PTPN1P18031 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PTPN1P18031 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC16.7■□□□□ 0.26
PTPN1P18031 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC16.7■□□□□ 0.26
PTPN1P18031 AC132872.4-202ENST00000622924 2756 ntBASIC16.7■□□□□ 0.26
PTPN1P18031 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC16.7■□□□□ 0.26
PTPN1P18031 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PTPN1P18031 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC16.7■□□□□ 0.26
PTPN1P18031 CLK3P2-201ENST00000427566 1453 ntBASIC16.7■□□□□ 0.26
PTPN1P18031 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PTPN1P18031 RN7SL399P-201ENST00000471648 279 ntBASIC16.7■□□□□ 0.26
PTPN1P18031 AC123567.1-201ENST00000548294 1261 ntBASIC16.7■□□□□ 0.26
PTPN1P18031 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC16.7■□□□□ 0.26
PTPN1P18031 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC16.7■□□□□ 0.26
PTPN1P18031 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC16.7■□□□□ 0.26
PTPN1P18031 AC008494.3-201ENST00000606615 944 ntBASIC16.7■□□□□ 0.26
PTPN1P18031 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC16.7■□□□□ 0.26
PTPN1P18031 MIR8072-201ENST00000614241 80 ntBASIC16.7■□□□□ 0.26
PTPN1P18031 AC007431.3-201ENST00000623221 587 ntBASIC16.7■□□□□ 0.26
PTPN1P18031 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
PTPN1P18031 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
PTPN1P18031 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC16.7■□□□□ 0.26
PTPN1P18031 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
PTPN1P18031 AP005117.1-202ENST00000581724 1908 ntBASIC16.7■□□□□ 0.26
PTPN1P18031 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC16.7■□□□□ 0.26
PTPN1P18031 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC16.7■□□□□ 0.26
PTPN1P18031 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
PTPN1P18031 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC16.7■□□□□ 0.26
PTPN1P18031 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PTPN1P18031 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PTPN1P18031 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PTPN1P18031 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
PTPN1P18031 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PTPN1P18031 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC16.69■□□□□ 0.26
PTPN1P18031 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PTPN1P18031 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PTPN1P18031 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC16.69■□□□□ 0.26
PTPN1P18031 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PTPN1P18031 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PTPN1P18031 DGCR5-201ENST00000399539 862 ntBASIC16.69■□□□□ 0.26
PTPN1P18031 AC098850.1-201ENST00000419919 790 ntBASIC16.69■□□□□ 0.26
PTPN1P18031 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PTPN1P18031 MYCLP2-201ENST00000449268 967 ntBASIC16.69■□□□□ 0.26
PTPN1P18031 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC16.69■□□□□ 0.26
PTPN1P18031 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC16.69■□□□□ 0.26
PTPN1P18031 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC16.69■□□□□ 0.26
PTPN1P18031 AC093726.1-201ENST00000608064 963 ntBASIC16.69■□□□□ 0.26
PTPN1P18031 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
PTPN1P18031 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC16.69■□□□□ 0.26
PTPN1P18031 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC16.69■□□□□ 0.26
PTPN1P18031 PRAL-201ENST00000624952 3286 ntBASIC16.69■□□□□ 0.26
PTPN1P18031 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PTPN1P18031 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC16.69■□□□□ 0.26
PTPN1P18031 TKT-202ENST00000423516 2075 ntTSL 2 BASIC16.69■□□□□ 0.26
PTPN1P18031 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PTPN1P18031 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC16.69■□□□□ 0.26
PTPN1P18031 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC16.69■□□□□ 0.26
PTPN1P18031 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PTPN1P18031 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PTPN1P18031 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC16.69■□□□□ 0.26
PTPN1P18031 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PTPN1P18031 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
PTPN1P18031 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PTPN1P18031 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PTPN1P18031 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
PTPN1P18031 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
PTPN1P18031 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PTPN1P18031 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PTPN1P18031 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
PTPN1P18031 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PTPN1P18031 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PTPN1P18031 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC16.68■□□□□ 0.26
PTPN1P18031 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PTPN1P18031 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PTPN1P18031 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PTPN1P18031 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms