Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC13.33□□□□□ -0.28
CD74P04233 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC13.33□□□□□ -0.28
CD74P04233 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC13.33□□□□□ -0.28
CD74P04233 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
CD74P04233 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CD74P04233 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC13.33□□□□□ -0.28
CD74P04233 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CD74P04233 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CD74P04233 AC006504.5-208ENST00000588784 2401 ntBASIC13.33□□□□□ -0.28
CD74P04233 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC13.33□□□□□ -0.28
CD74P04233 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CD74P04233 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
CD74P04233 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CD74P04233 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
CD74P04233 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CD74P04233 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CD74P04233 ARHGAP23P1-201ENST00000562773 1937 ntBASIC13.33□□□□□ -0.28
CD74P04233 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC13.33□□□□□ -0.28
CD74P04233 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.28
CD74P04233 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CD74P04233 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
CD74P04233 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.28
CD74P04233 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
CD74P04233 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
CD74P04233 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
CD74P04233 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
CD74P04233 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
CD74P04233 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC13.32□□□□□ -0.28
CD74P04233 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC13.32□□□□□ -0.28
CD74P04233 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC13.32□□□□□ -0.28
CD74P04233 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC13.32□□□□□ -0.28
CD74P04233 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CD74P04233 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CD74P04233 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CD74P04233 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CD74P04233 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CD74P04233 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC13.32□□□□□ -0.28
CD74P04233 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
CD74P04233 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
CD74P04233 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CD74P04233 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CD74P04233 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CD74P04233 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CD74P04233 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC13.32□□□□□ -0.28
CD74P04233 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CD74P04233 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CD74P04233 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC13.32□□□□□ -0.28
CD74P04233 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC13.32□□□□□ -0.28
CD74P04233 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC13.32□□□□□ -0.28
CD74P04233 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC13.32□□□□□ -0.28
CD74P04233 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CD74P04233 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC13.32□□□□□ -0.28
CD74P04233 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC13.32□□□□□ -0.28
CD74P04233 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
CD74P04233 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC13.32□□□□□ -0.28
CD74P04233 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC13.32□□□□□ -0.28
CD74P04233 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC13.32□□□□□ -0.28
CD74P04233 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CD74P04233 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
CD74P04233 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC13.32□□□□□ -0.28
CD74P04233 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC13.32□□□□□ -0.28
CD74P04233 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CD74P04233 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC13.32□□□□□ -0.28
CD74P04233 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
CD74P04233 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CD74P04233 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC13.32□□□□□ -0.28
CD74P04233 AC005252.3-201ENST00000623855 2258 ntBASIC13.32□□□□□ -0.28
CD74P04233 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CD74P04233 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CD74P04233 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CD74P04233 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CD74P04233 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
CD74P04233 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CD74P04233 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CD74P04233 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC13.31□□□□□ -0.28
CD74P04233 AC015656.1-201ENST00000624209 3578 ntBASIC13.31□□□□□ -0.28
CD74P04233 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CD74P04233 BEND3P1-201ENST00000421591 1944 ntBASIC13.31□□□□□ -0.28
CD74P04233 OS9-207ENST00000439210 1946 ntTSL 2 BASIC13.31□□□□□ -0.28
CD74P04233 HSPA7-201ENST00000445535 1927 ntBASIC13.31□□□□□ -0.28
CD74P04233 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CD74P04233 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CD74P04233 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC13.31□□□□□ -0.28
CD74P04233 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CD74P04233 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
CD74P04233 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CD74P04233 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC13.31□□□□□ -0.28
CD74P04233 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
CD74P04233 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CD74P04233 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC13.31□□□□□ -0.28
CD74P04233 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CD74P04233 MPI-203ENST00000535694 1523 ntTSL 2 BASIC13.31□□□□□ -0.28
CD74P04233 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC13.31□□□□□ -0.28
CD74P04233 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC13.31□□□□□ -0.28
CD74P04233 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
CD74P04233 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC13.31□□□□□ -0.28
CD74P04233 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC13.31□□□□□ -0.28
CD74P04233 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC13.31□□□□□ -0.28
CD74P04233 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
CD74P04233 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms