Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
MBD4O95243 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
MBD4O95243 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
MBD4O95243 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
MBD4O95243 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC18.78■□□□□ 0.6
MBD4O95243 GAPDHP21-201ENST00000450301 1010 ntBASIC18.78■□□□□ 0.6
MBD4O95243 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC18.78■□□□□ 0.6
MBD4O95243 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC18.78■□□□□ 0.6
MBD4O95243 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
MBD4O95243 POLE2-203ENST00000553805 496 ntTSL 2 BASIC18.78■□□□□ 0.6
MBD4O95243 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC18.78■□□□□ 0.6
MBD4O95243 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
MBD4O95243 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
MBD4O95243 AC000095.1-201ENST00000603208 874 ntBASIC18.78■□□□□ 0.6
MBD4O95243 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
MBD4O95243 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC18.78■□□□□ 0.6
MBD4O95243 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC18.78■□□□□ 0.6
MBD4O95243 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
MBD4O95243 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
MBD4O95243 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC18.78■□□□□ 0.6
MBD4O95243 TK1-203ENST00000588734 1681 ntTSL 2 BASIC18.78■□□□□ 0.6
MBD4O95243 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
MBD4O95243 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC18.78■□□□□ 0.6
MBD4O95243 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
MBD4O95243 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC18.78■□□□□ 0.6
MBD4O95243 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
MBD4O95243 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
MBD4O95243 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
MBD4O95243 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
MBD4O95243 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
MBD4O95243 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
MBD4O95243 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC18.77■□□□□ 0.6
MBD4O95243 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
MBD4O95243 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
MBD4O95243 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC18.77■□□□□ 0.6
MBD4O95243 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
MBD4O95243 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC18.77■□□□□ 0.6
MBD4O95243 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
MBD4O95243 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
MBD4O95243 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC18.77■□□□□ 0.6
MBD4O95243 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
MBD4O95243 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
MBD4O95243 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC18.77■□□□□ 0.6
MBD4O95243 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
MBD4O95243 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
MBD4O95243 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC18.77■□□□□ 0.6
MBD4O95243 INE1-201ENST00000456273 945 ntBASIC18.77■□□□□ 0.6
MBD4O95243 RN7SL752P-201ENST00000463779 287 ntBASIC18.77■□□□□ 0.6
MBD4O95243 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC18.77■□□□□ 0.6
MBD4O95243 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC18.77■□□□□ 0.6
MBD4O95243 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC18.77■□□□□ 0.6
MBD4O95243 AC015910.1-201ENST00000579400 975 ntBASIC18.77■□□□□ 0.6
MBD4O95243 GPX4-206ENST00000588919 803 ntTSL 2 BASIC18.77■□□□□ 0.6
MBD4O95243 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
MBD4O95243 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
MBD4O95243 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC18.77■□□□□ 0.59
MBD4O95243 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC18.77■□□□□ 0.59
MBD4O95243 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
MBD4O95243 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
MBD4O95243 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
MBD4O95243 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC18.77■□□□□ 0.59
MBD4O95243 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
MBD4O95243 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
MBD4O95243 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
MBD4O95243 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
MBD4O95243 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
MBD4O95243 CU639417.3-201ENST00000624240 1404 ntBASIC18.76■□□□□ 0.59
MBD4O95243 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
MBD4O95243 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
MBD4O95243 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC18.76■□□□□ 0.59
MBD4O95243 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
MBD4O95243 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
MBD4O95243 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
MBD4O95243 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
MBD4O95243 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
MBD4O95243 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
MBD4O95243 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
MBD4O95243 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC18.76■□□□□ 0.59
MBD4O95243 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC18.76■□□□□ 0.59
MBD4O95243 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC18.76■□□□□ 0.59
MBD4O95243 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC18.76■□□□□ 0.59
MBD4O95243 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC18.76■□□□□ 0.59
MBD4O95243 BRI3BPP1-201ENST00000594224 787 ntBASIC18.76■□□□□ 0.59
MBD4O95243 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
MBD4O95243 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC18.76■□□□□ 0.59
MBD4O95243 AL049840.4-201ENST00000602422 811 ntBASIC18.76■□□□□ 0.59
MBD4O95243 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
MBD4O95243 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
MBD4O95243 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC18.76■□□□□ 0.59
MBD4O95243 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
MBD4O95243 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
MBD4O95243 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
MBD4O95243 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
MBD4O95243 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC18.76■□□□□ 0.59
MBD4O95243 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
MBD4O95243 TNRC18P3-201ENST00000441896 2691 ntBASIC18.76■□□□□ 0.59
MBD4O95243 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
MBD4O95243 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
MBD4O95243 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
MBD4O95243 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms