Protein–RNA interactions for Protein: O75112

LDB3, LIM domain-binding protein 3, humanhuman

Predictions only

Length 727 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3O75112 SLC9A7P1-201ENST00000554295 3311 ntBASIC14.88□□□□□ -0.03
LDB3O75112 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LDB3O75112 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
LDB3O75112 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
LDB3O75112 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LDB3O75112 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LDB3O75112 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
LDB3O75112 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC14.88□□□□□ -0.03
LDB3O75112 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
LDB3O75112 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC14.88□□□□□ -0.03
LDB3O75112 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC14.88□□□□□ -0.03
LDB3O75112 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
LDB3O75112 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC14.88□□□□□ -0.03
LDB3O75112 MDH2-205ENST00000461263 648 ntTSL 2 BASIC14.88□□□□□ -0.03
LDB3O75112 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC14.88□□□□□ -0.03
LDB3O75112 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC14.88□□□□□ -0.03
LDB3O75112 RNA5SP421-201ENST00000516864 134 ntBASIC14.88□□□□□ -0.03
LDB3O75112 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC14.88□□□□□ -0.03
LDB3O75112 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC14.88□□□□□ -0.03
LDB3O75112 STOM-203ENST00000538954 1257 ntTSL 5 BASIC14.88□□□□□ -0.03
LDB3O75112 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC14.88□□□□□ -0.03
LDB3O75112 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC14.88□□□□□ -0.03
LDB3O75112 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC14.88□□□□□ -0.03
LDB3O75112 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC14.88□□□□□ -0.03
LDB3O75112 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
LDB3O75112 INO80C-206ENST00000586489 594 ntTSL 3 BASIC14.88□□□□□ -0.03
LDB3O75112 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
LDB3O75112 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC14.88□□□□□ -0.03
LDB3O75112 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC14.88□□□□□ -0.03
LDB3O75112 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC14.88□□□□□ -0.03
LDB3O75112 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LDB3O75112 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LDB3O75112 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC14.88□□□□□ -0.03
LDB3O75112 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
LDB3O75112 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LDB3O75112 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LDB3O75112 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
LDB3O75112 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
LDB3O75112 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
LDB3O75112 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC14.88□□□□□ -0.03
LDB3O75112 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
LDB3O75112 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC14.88□□□□□ -0.03
LDB3O75112 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC14.87□□□□□ -0.03
LDB3O75112 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
LDB3O75112 ILF3-AS1-201ENST00000591501 1983 ntBASIC14.87□□□□□ -0.03
LDB3O75112 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC14.87□□□□□ -0.03
LDB3O75112 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC14.87□□□□□ -0.03
LDB3O75112 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LDB3O75112 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
LDB3O75112 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
LDB3O75112 AC105917.1-201ENST00000506637 2539 ntBASIC14.87□□□□□ -0.03
LDB3O75112 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC14.87□□□□□ -0.03
LDB3O75112 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
LDB3O75112 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
LDB3O75112 MRPS18AP1-201ENST00000414458 589 ntBASIC14.87□□□□□ -0.03
LDB3O75112 AC074338.1-201ENST00000416825 156 ntBASIC14.87□□□□□ -0.03
LDB3O75112 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC14.87□□□□□ -0.03
LDB3O75112 UGT1A2P-201ENST00000454886 866 ntBASIC14.87□□□□□ -0.03
LDB3O75112 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC14.87□□□□□ -0.03
LDB3O75112 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC14.87□□□□□ -0.03
LDB3O75112 SDHAP3-202ENST00000515467 728 ntBASIC14.87□□□□□ -0.03
LDB3O75112 RAB35-202ENST00000534951 939 ntTSL 2 BASIC14.87□□□□□ -0.03
LDB3O75112 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC14.87□□□□□ -0.03
LDB3O75112 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC14.87□□□□□ -0.03
LDB3O75112 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC14.87□□□□□ -0.03
LDB3O75112 LINC01115-203ENST00000606068 577 ntBASIC14.87□□□□□ -0.03
LDB3O75112 AC008738.7-201ENST00000609744 511 ntBASIC14.87□□□□□ -0.03
LDB3O75112 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC14.87□□□□□ -0.03
LDB3O75112 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
LDB3O75112 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LDB3O75112 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LDB3O75112 Z97205.2-201ENST00000564697 1639 ntBASIC14.87□□□□□ -0.03
LDB3O75112 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC14.87□□□□□ -0.03
LDB3O75112 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC14.87□□□□□ -0.03
LDB3O75112 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC14.87□□□□□ -0.03
LDB3O75112 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC14.87□□□□□ -0.03
LDB3O75112 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
LDB3O75112 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
LDB3O75112 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LDB3O75112 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LDB3O75112 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC14.87□□□□□ -0.03
LDB3O75112 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LDB3O75112 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
LDB3O75112 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
LDB3O75112 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC14.87□□□□□ -0.03
LDB3O75112 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
LDB3O75112 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LDB3O75112 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC14.87□□□□□ -0.03
LDB3O75112 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
LDB3O75112 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
LDB3O75112 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LDB3O75112 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC14.86□□□□□ -0.03
LDB3O75112 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC14.86□□□□□ -0.03
LDB3O75112 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC14.86□□□□□ -0.03
LDB3O75112 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LDB3O75112 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LDB3O75112 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
LDB3O75112 DKFZP434H168-201ENST00000567381 1905 ntBASIC14.86□□□□□ -0.03
LDB3O75112 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LDB3O75112 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms