Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
GFRA3O60609 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC15.13■□□□□ 0.01
GFRA3O60609 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
GFRA3O60609 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC15.13■□□□□ 0.01
GFRA3O60609 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC15.13■□□□□ 0.01
GFRA3O60609 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC15.13■□□□□ 0.01
GFRA3O60609 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
GFRA3O60609 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
GFRA3O60609 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
GFRA3O60609 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
GFRA3O60609 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
GFRA3O60609 Z69890.1-201ENST00000382990 339 ntBASIC15.13■□□□□ 0.01
GFRA3O60609 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
GFRA3O60609 HNRNPA1P58-201ENST00000403629 610 ntBASIC15.13■□□□□ 0.01
GFRA3O60609 FRGCA-201ENST00000424933 422 ntTSL 3 BASIC15.13■□□□□ 0.01
GFRA3O60609 GOSR1-204ENST00000451249 1231 ntAPPRIS ALT1 TSL 2 BASIC15.13■□□□□ 0.01
GFRA3O60609 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
GFRA3O60609 RPP40-203ENST00000464646 1042 ntTSL 5 BASIC15.13■□□□□ 0.01
GFRA3O60609 AREG-202ENST00000502307 956 ntTSL 5 BASIC15.13■□□□□ 0.01
GFRA3O60609 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC15.13■□□□□ 0.01
GFRA3O60609 AP003171.2-201ENST00000528208 925 ntBASIC15.13■□□□□ 0.01
GFRA3O60609 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC15.13■□□□□ 0.01
GFRA3O60609 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC15.13■□□□□ 0.01
GFRA3O60609 AC005696.1-201ENST00000572876 443 ntTSL 2 BASIC15.13■□□□□ 0.01
GFRA3O60609 AC010504.1-201ENST00000591311 585 ntTSL 3 BASIC15.13■□□□□ 0.01
GFRA3O60609 OR13I1P-201ENST00000609811 1264 ntBASIC15.13■□□□□ 0.01
GFRA3O60609 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC15.13■□□□□ 0.01
GFRA3O60609 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
GFRA3O60609 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
GFRA3O60609 AC106774.7-201ENST00000638408 597 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
GFRA3O60609 AC106774.6-201ENST00000638483 597 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
GFRA3O60609 AC233724.20-201ENST00000638842 597 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
GFRA3O60609 AC233724.19-201ENST00000639969 597 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
GFRA3O60609 AC106774.5-201ENST00000640558 597 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
GFRA3O60609 AC233724.18-201ENST00000640803 597 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
GFRA3O60609 AC233724.21-201ENST00000640846 597 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
GFRA3O60609 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
GFRA3O60609 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC15.13■□□□□ 0.01
GFRA3O60609 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC15.13■□□□□ 0.01
GFRA3O60609 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
GFRA3O60609 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
GFRA3O60609 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
GFRA3O60609 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
GFRA3O60609 F11R-206ENST00000621309 4770 ntTSL 5 BASIC15.13■□□□□ 0.01
GFRA3O60609 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC15.13■□□□□ 0.01
GFRA3O60609 LRRC59-203ENST00000576448 1531 ntBASIC15.12■□□□□ 0.01
GFRA3O60609 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
GFRA3O60609 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
GFRA3O60609 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
GFRA3O60609 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
GFRA3O60609 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
GFRA3O60609 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
GFRA3O60609 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
GFRA3O60609 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
GFRA3O60609 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
GFRA3O60609 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
GFRA3O60609 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
GFRA3O60609 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
GFRA3O60609 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
GFRA3O60609 NOC2LP2-201ENST00000407594 1944 ntBASIC15.12■□□□□ 0.01
GFRA3O60609 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
GFRA3O60609 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
GFRA3O60609 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
GFRA3O60609 PPA2-204ENST00000354147 667 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
GFRA3O60609 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
GFRA3O60609 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
GFRA3O60609 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
GFRA3O60609 AL592076.1-201ENST00000424448 303 ntBASIC15.12■□□□□ 0.01
GFRA3O60609 BCAS2P2-201ENST00000425064 674 ntBASIC15.12■□□□□ 0.01
GFRA3O60609 OST4-201ENST00000429985 559 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
GFRA3O60609 PPA2-205ENST00000432483 859 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
GFRA3O60609 AL591242.1-203ENST00000434329 374 ntTSL 3 BASIC15.12■□□□□ 0.01
GFRA3O60609 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
GFRA3O60609 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
GFRA3O60609 IGHEP1-201ENST00000521393 651 ntBASIC15.12■□□□□ 0.01
GFRA3O60609 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC15.12■□□□□ 0.01
GFRA3O60609 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC15.12■□□□□ 0.01
GFRA3O60609 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
GFRA3O60609 RPL17P45-201ENST00000586289 509 ntBASIC15.12■□□□□ 0.01
GFRA3O60609 AL451064.1-201ENST00000607718 471 ntBASIC15.12■□□□□ 0.01
GFRA3O60609 PTPN20CP-201ENST00000614090 920 ntBASIC15.12■□□□□ 0.01
GFRA3O60609 AC092299.1-201ENST00000632679 757 ntBASIC15.12■□□□□ 0.01
GFRA3O60609 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
GFRA3O60609 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
GFRA3O60609 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
GFRA3O60609 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
GFRA3O60609 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
GFRA3O60609 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
GFRA3O60609 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
GFRA3O60609 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
GFRA3O60609 CSF3-201ENST00000225474 1509 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
GFRA3O60609 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC15.12■□□□□ 0.01
GFRA3O60609 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
GFRA3O60609 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC15.12■□□□□ 0.01
GFRA3O60609 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
GFRA3O60609 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
GFRA3O60609 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
GFRA3O60609 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC15.11■□□□□ 0.01
GFRA3O60609 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
GFRA3O60609 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC15.11■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms