Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
LCMT2O60294 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC15.12■□□□□ 0.01
LCMT2O60294 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LCMT2O60294 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
LCMT2O60294 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
LCMT2O60294 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
LCMT2O60294 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LCMT2O60294 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
LCMT2O60294 HNRNPA1P40-201ENST00000426371 1278 ntBASIC15.12■□□□□ 0.01
LCMT2O60294 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC15.12■□□□□ 0.01
LCMT2O60294 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC15.12■□□□□ 0.01
LCMT2O60294 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
LCMT2O60294 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC15.12■□□□□ 0.01
LCMT2O60294 AC074044.1-201ENST00000609673 707 ntBASIC15.12■□□□□ 0.01
LCMT2O60294 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC15.12■□□□□ 0.01
LCMT2O60294 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
LCMT2O60294 LOX-206ENST00000639739 1626 ntTSL 5 BASIC15.12■□□□□ 0.01
LCMT2O60294 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
LCMT2O60294 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
LCMT2O60294 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
LCMT2O60294 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
LCMT2O60294 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LCMT2O60294 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC15.12■□□□□ 0.01
LCMT2O60294 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LCMT2O60294 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC15.12■□□□□ 0.01
LCMT2O60294 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC15.12■□□□□ 0.01
LCMT2O60294 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
LCMT2O60294 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
LCMT2O60294 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LCMT2O60294 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
LCMT2O60294 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LCMT2O60294 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
LCMT2O60294 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LCMT2O60294 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
LCMT2O60294 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
LCMT2O60294 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
LCMT2O60294 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
LCMT2O60294 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
LCMT2O60294 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
LCMT2O60294 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC15.11■□□□□ 0.01
LCMT2O60294 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
LCMT2O60294 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC15.11■□□□□ 0.01
LCMT2O60294 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LCMT2O60294 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC15.11■□□□□ 0.01
LCMT2O60294 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
LCMT2O60294 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC15.11■□□□□ 0.01
LCMT2O60294 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
LCMT2O60294 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
LCMT2O60294 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC15.11■□□□□ 0.01
LCMT2O60294 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LCMT2O60294 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LCMT2O60294 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
LCMT2O60294 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC15.11■□□□□ 0.01
LCMT2O60294 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
LCMT2O60294 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC15.11■□□□□ 0.01
LCMT2O60294 AC114501.2-201ENST00000439631 535 ntBASIC15.11■□□□□ 0.01
LCMT2O60294 RPL13P2-201ENST00000440687 659 ntBASIC15.11■□□□□ 0.01
LCMT2O60294 USP40-206ENST00000443711 628 ntTSL 2 BASIC15.11■□□□□ 0.01
LCMT2O60294 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC15.11■□□□□ 0.01
LCMT2O60294 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
LCMT2O60294 SPDYE18-201ENST00000510091 1050 ntBASIC15.11■□□□□ 0.01
LCMT2O60294 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC15.11■□□□□ 0.01
LCMT2O60294 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC15.11■□□□□ 0.01
LCMT2O60294 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC15.11■□□□□ 0.01
LCMT2O60294 STOM-203ENST00000538954 1257 ntTSL 5 BASIC15.11■□□□□ 0.01
LCMT2O60294 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC15.11■□□□□ 0.01
LCMT2O60294 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC15.11■□□□□ 0.01
LCMT2O60294 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC15.11■□□□□ 0.01
LCMT2O60294 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC15.11■□□□□ 0.01
LCMT2O60294 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LCMT2O60294 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC15.11■□□□□ 0.01
LCMT2O60294 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LCMT2O60294 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
LCMT2O60294 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
LCMT2O60294 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LCMT2O60294 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LCMT2O60294 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC15.11■□□□□ 0.01
LCMT2O60294 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LCMT2O60294 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
LCMT2O60294 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LCMT2O60294 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
LCMT2O60294 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LCMT2O60294 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
LCMT2O60294 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
LCMT2O60294 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
LCMT2O60294 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
LCMT2O60294 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
LCMT2O60294 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
LCMT2O60294 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
LCMT2O60294 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LCMT2O60294 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
LCMT2O60294 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
LCMT2O60294 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
LCMT2O60294 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
LCMT2O60294 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LCMT2O60294 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LCMT2O60294 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
LCMT2O60294 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LCMT2O60294 BTBD7P1-201ENST00000447253 1453 ntBASIC15.1■□□□□ 0.01
LCMT2O60294 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC15.1■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms