Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC16.09■□□□□ 0.17
RIPK2O43353 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
RIPK2O43353 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RIPK2O43353 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RIPK2O43353 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
RIPK2O43353 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
RIPK2O43353 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC16.09■□□□□ 0.17
RIPK2O43353 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
RIPK2O43353 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
RIPK2O43353 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.17
RIPK2O43353 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
RIPK2O43353 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
RIPK2O43353 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
RIPK2O43353 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC16.08■□□□□ 0.17
RIPK2O43353 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.17
RIPK2O43353 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC16.08■□□□□ 0.16
RIPK2O43353 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC16.08■□□□□ 0.16
RIPK2O43353 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RIPK2O43353 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RIPK2O43353 KRT18P67-201ENST00000432816 1264 ntBASIC16.08■□□□□ 0.16
RIPK2O43353 AF186996.4-201ENST00000467186 377 ntBASIC16.08■□□□□ 0.16
RIPK2O43353 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
RIPK2O43353 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
RIPK2O43353 TPM1-226ENST00000560959 925 ntTSL 2 BASIC16.08■□□□□ 0.16
RIPK2O43353 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC16.08■□□□□ 0.16
RIPK2O43353 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC16.08■□□□□ 0.16
RIPK2O43353 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC16.08■□□□□ 0.16
RIPK2O43353 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC16.08■□□□□ 0.16
RIPK2O43353 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
RIPK2O43353 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
RIPK2O43353 AC148477.8-201ENST00000624298 468 ntBASIC16.08■□□□□ 0.16
RIPK2O43353 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC16.08■□□□□ 0.16
RIPK2O43353 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
RIPK2O43353 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RIPK2O43353 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
RIPK2O43353 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
RIPK2O43353 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RIPK2O43353 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC16.08■□□□□ 0.16
RIPK2O43353 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RIPK2O43353 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC16.08■□□□□ 0.16
RIPK2O43353 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RIPK2O43353 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
RIPK2O43353 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC16.08■□□□□ 0.16
RIPK2O43353 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
RIPK2O43353 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC16.08■□□□□ 0.16
RIPK2O43353 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC16.08■□□□□ 0.16
RIPK2O43353 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC16.07■□□□□ 0.16
RIPK2O43353 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RIPK2O43353 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
RIPK2O43353 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RIPK2O43353 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
RIPK2O43353 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RIPK2O43353 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
RIPK2O43353 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
RIPK2O43353 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
RIPK2O43353 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
RIPK2O43353 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RIPK2O43353 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
RIPK2O43353 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RIPK2O43353 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
RIPK2O43353 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC16.07■□□□□ 0.16
RIPK2O43353 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RIPK2O43353 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
RIPK2O43353 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RIPK2O43353 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
RIPK2O43353 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
RIPK2O43353 CRYGEP-201ENST00000412192 528 ntBASIC16.07■□□□□ 0.16
RIPK2O43353 AC098859.1-201ENST00000502915 1238 ntBASIC16.07■□□□□ 0.16
RIPK2O43353 NMU-203ENST00000507338 658 ntTSL 3 BASIC16.07■□□□□ 0.16
RIPK2O43353 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC16.07■□□□□ 0.16
RIPK2O43353 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC16.07■□□□□ 0.16
RIPK2O43353 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC16.07■□□□□ 0.16
RIPK2O43353 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC16.07■□□□□ 0.16
RIPK2O43353 AC024267.1-201ENST00000582320 895 ntBASIC16.07■□□□□ 0.16
RIPK2O43353 AL450472.2-201ENST00000603663 1156 ntBASIC16.07■□□□□ 0.16
RIPK2O43353 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RIPK2O43353 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC16.07■□□□□ 0.16
RIPK2O43353 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RIPK2O43353 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RIPK2O43353 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
RIPK2O43353 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC16.07■□□□□ 0.16
RIPK2O43353 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RIPK2O43353 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC16.07■□□□□ 0.16
RIPK2O43353 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC16.07■□□□□ 0.16
RIPK2O43353 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC16.07■□□□□ 0.16
RIPK2O43353 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC16.07■□□□□ 0.16
RIPK2O43353 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
RIPK2O43353 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC16.07■□□□□ 0.16
RIPK2O43353 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
RIPK2O43353 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
RIPK2O43353 AC104581.4-201ENST00000623126 3052 ntBASIC16.07■□□□□ 0.16
RIPK2O43353 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
RIPK2O43353 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
RIPK2O43353 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RIPK2O43353 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
RIPK2O43353 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RIPK2O43353 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RIPK2O43353 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RIPK2O43353 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC16.06■□□□□ 0.16
RIPK2O43353 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC16.06■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 64.1 ms